Zinc in PDB 6gzu: Structure of Chlamydia Abortus Effector Protein Chladub

The structure of Structure of Chlamydia Abortus Effector Protein Chladub, PDB code: 6gzu was solved by J.N.Pruneda, D.Komander, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.86 / 1.47
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	40.337, 41.775, 44.209, 94.72, 102.17, 101.23
R / Rfree (%)	15.2 / 18.2

The binding sites of Zinc atom in the Structure of Chlamydia Abortus Effector Protein Chladub (pdb code 6gzu). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of Chlamydia Abortus Effector Protein Chladub, PDB code: 6gzu:

Zinc binding site 1 out of 1 in the Structure of Chlamydia Abortus Effector Protein Chladub


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Chlamydia Abortus Effector Protein Chladub within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn402 b:35.4 occ:1.00 NE2 A:HIS165 2.0 33.7 1.0 ND1 A:HIS185 2.0 30.4 1.0 SG A:CYS200 2.2 37.9 1.0 SG A:CYS183 2.3 35.5 1.0 CE1 A:HIS165 2.8 34.3 1.0 CE1 A:HIS185 3.0 27.5 1.0 CG A:HIS185 3.1 30.4 1.0 CD2 A:HIS165 3.1 31.3 1.0 CB A:CYS183 3.2 35.8 1.0 CB A:CYS200 3.2 34.6 1.0 CB A:HIS185 3.4 31.7 1.0 CA A:CYS183 3.9 36.4 1.0 ND1 A:HIS165 4.0 35.9 1.0 N A:HIS185 4.1 33.9 1.0 NE2 A:HIS185 4.1 26.9 1.0 CG A:HIS165 4.2 31.0 1.0 CD2 A:HIS185 4.2 28.2 1.0 CA A:HIS185 4.4 32.7 1.0 N A:HIS184 4.4 36.0 1.0 C A:CYS183 4.4 36.2 1.0 CA A:CYS200 4.5 35.3 1.0 C A:CYS200 4.6 37.0 1.0 O A:CYS200 4.8 38.7 1.0

J.N.Pruneda, R.J.Bastidas, E.Bertsoulaki, K.N.Swatek, B.Santhanam, M.J.Clague, R.H.Valdivia, S.Urbe, D.Komander. A Chlamydia Effector Combining Deubiquitination and Acetylation Activities Induces Golgi Fragmentation. Nat Microbiol V. 3 1377 2018.
ISSN: ESSN 2058-5276
PubMed: 30397340
DOI: 10.1038/S41564-018-0271-Y