Zinc in PDB 6gv0: Insulin Glulisine

Protein crystallography data

The structure of Insulin Glulisine, PDB code: 6gv0 was solved by N.E.Chayen, J.R.Helliwell, H.V.Solomon-Gamsu, L.Govada, M.Morgan, R.B.Gillis, G.Adams, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.49 / 1.26
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 82.440, 82.440, 33.650, 90.00, 90.00, 120.00
R / Rfree (%) 12.8 / 15.2

Zinc Binding Sites:

The binding sites of Zinc atom in the Insulin Glulisine (pdb code 6gv0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Insulin Glulisine, PDB code: 6gv0:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6gv0

Go back to Zinc Binding Sites List in 6gv0
Zinc binding site 1 out of 2 in the Insulin Glulisine


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Insulin Glulisine within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn101

b:23.2
occ:0.15
NE2 B:HIS10 2.0 30.8 1.0
O B:HOH219 2.1 32.3 0.1
CE1 B:HIS10 3.0 39.6 1.0
CD2 B:HIS10 3.1 29.2 1.0
HE1 B:HIS10 3.1 47.5 1.0
HD2 B:HIS10 3.3 35.0 1.0
ND1 B:HIS10 4.1 37.7 1.0
CG B:HIS10 4.2 26.8 1.0
HG B:SER9 4.5 46.3 0.6
OG B:SER9 4.8 38.6 0.6
HD1 B:HIS10 4.9 45.2 1.0

Zinc binding site 2 out of 2 in 6gv0

Go back to Zinc Binding Sites List in 6gv0
Zinc binding site 2 out of 2 in the Insulin Glulisine


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Insulin Glulisine within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn101

b:33.0
occ:0.15
O D:HOH225 2.0 29.0 0.1
NE2 D:HIS10 2.3 42.9 1.0
HE1 D:HIS10 2.8 48.9 1.0
CE1 D:HIS10 2.9 40.8 1.0
CD2 D:HIS10 3.5 40.4 1.0
HD2 D:HIS10 3.8 48.5 1.0
ND1 D:HIS10 4.1 34.7 1.0
CG D:HIS10 4.4 30.5 1.0
HD1 D:HIS10 4.8 41.7 1.0
HG D:SER9 5.0 32.8 0.8

Reference:

N.E.Chayen, J.R.Helliwell, G.Adams. Insulin Glulisine To Be Published.
Page generated: Wed Dec 16 11:53:17 2020

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