Zinc in PDB 6gpg: Structure of the Rig-I Singleton-Merten Syndrome Variant C268F

All present enzymatic activity of Structure of the Rig-I Singleton-Merten Syndrome Variant C268F:
3.6.4.13;

The structure of Structure of the Rig-I Singleton-Merten Syndrome Variant C268F, PDB code: 6gpg was solved by C.Laessig, K.Lammens, K.-P.Hopfer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.47 / 2.89
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	175.620, 175.620, 109.530, 90.00, 90.00, 120.00
R / Rfree (%)	21 / 26

The structure of Structure of the Rig-I Singleton-Merten Syndrome Variant C268F also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

The binding sites of Zinc atom in the Structure of the Rig-I Singleton-Merten Syndrome Variant C268F (pdb code 6gpg). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of the Rig-I Singleton-Merten Syndrome Variant C268F, PDB code: 6gpg:

Zinc binding site 1 out of 1 in the Structure of the Rig-I Singleton-Merten Syndrome Variant C268F


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Rig-I Singleton-Merten Syndrome Variant C268F within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1001 b:0.4 occ:1.00 SG A:CYS813 2.3 0.9 1.0 SG A:CYS810 2.4 0.8 1.0 SG A:CYS869 2.4 0.2 1.0 CZ2 A:TRP873 2.5 0.2 1.0 SG A:CYS864 2.8 0.9 1.0 CB A:CYS810 3.0 0.1 1.0 CH2 A:TRP873 3.0 0.4 1.0 CB A:CYS813 3.1 0.7 1.0 N A:CYS813 3.3 0.6 1.0 CB A:CYS864 3.5 0.5 1.0 CA A:CYS813 3.7 0.4 1.0 CE2 A:TRP873 3.8 0.9 1.0 CB A:CYS869 3.8 0.9 1.0 C A:LYS812 4.0 0.3 1.0 NE1 A:TRP873 4.4 0.4 1.0 CZ3 A:TRP873 4.4 0.7 1.0 CA A:CYS810 4.5 0.5 1.0 C A:CYS813 4.5 0.5 1.0 N A:LYS814 4.6 0.2 1.0 O A:LYS812 4.6 0.4 1.0 N A:LYS812 4.6 1.0 1.0 CA A:LYS812 4.7 0.3 1.0 CA A:CYS864 4.9 0.4 1.0 CB A:HIS871 5.0 0.0 1.0 CB A:ARG866 5.0 1.0 1.0 CD2 A:TRP873 5.0 0.2 1.0 CB A:LYS812 5.0 0.6 1.0

C.Lassig, K.Lammens, J.L.Gorenflos Lopez, S.Michalski, O.Fettscher, K.P.Hopfner. Unified Mechanisms For Self-Rna Recognition By Rig-I Singleton-Merten Syndrome Variants. Elife V. 7 2018.
ISSN: ESSN 2050-084X
PubMed: 30047865
DOI: 10.7554/ELIFE.38958