Atomistry » Zinc » PDB 5fz6-5g1c » 5g03
Atomistry »
  Zinc »
    PDB 5fz6-5g1c »
      5g03 »

Zinc in PDB 5g03: An Unusual Natural Product Primary Sulfonamide: Synthesis, Carbonic Anhydrase Inhibition and Protein X-Ray Structure of Psammaplin C

Enzymatic activity of An Unusual Natural Product Primary Sulfonamide: Synthesis, Carbonic Anhydrase Inhibition and Protein X-Ray Structure of Psammaplin C

All present enzymatic activity of An Unusual Natural Product Primary Sulfonamide: Synthesis, Carbonic Anhydrase Inhibition and Protein X-Ray Structure of Psammaplin C:
4.2.1.1;

Protein crystallography data

The structure of An Unusual Natural Product Primary Sulfonamide: Synthesis, Carbonic Anhydrase Inhibition and Protein X-Ray Structure of Psammaplin C, PDB code: 5g03 was solved by P.Mujumdar, C.T.Supuran, T.S.Peat, S.A.Poulsen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 69.62 / 1.35
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 41.880, 41.280, 71.788, 90.00, 104.11, 90.00
R / Rfree (%) 12.8 / 16

Other elements in 5g03:

The structure of An Unusual Natural Product Primary Sulfonamide: Synthesis, Carbonic Anhydrase Inhibition and Protein X-Ray Structure of Psammaplin C also contains other interesting chemical elements:

Bromine (Br) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the An Unusual Natural Product Primary Sulfonamide: Synthesis, Carbonic Anhydrase Inhibition and Protein X-Ray Structure of Psammaplin C (pdb code 5g03). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the An Unusual Natural Product Primary Sulfonamide: Synthesis, Carbonic Anhydrase Inhibition and Protein X-Ray Structure of Psammaplin C, PDB code: 5g03:

Zinc binding site 1 out of 1 in 5g03

Go back to Zinc Binding Sites List in 5g03
Zinc binding site 1 out of 1 in the An Unusual Natural Product Primary Sulfonamide: Synthesis, Carbonic Anhydrase Inhibition and Protein X-Ray Structure of Psammaplin C


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of An Unusual Natural Product Primary Sulfonamide: Synthesis, Carbonic Anhydrase Inhibition and Protein X-Ray Structure of Psammaplin C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn312

b:6.5
occ:1.00
 N8 A:OE21263 1.9 5.5 0.8
ND1 A:HIS119 2.1 6.6 1.0
NE2 A:HIS94 2.1 7.3 1.0
NE2 A:HIS96 2.1 5.7 1.0
CE1 A:HIS119 2.9 6.2 1.0
CD2 A:HIS94 3.0 7.8 1.0
S6 A:OE21263 3.0 7.6 0.8
O9 A:OE21263 3.0 9.6 0.8
CD2 A:HIS96 3.0 6.0 1.0
CE1 A:HIS96 3.1 6.9 1.0
CE1 A:HIS94 3.1 7.8 1.0
CG A:HIS119 3.2 6.0 1.0
CB A:HIS119 3.6 6.3 1.0
OG1 A:THR199 3.9 7.2 1.0
OE1 A:GLU106 4.0 7.5 1.0
O7 A:OE21263 4.1 6.3 0.8
NE2 A:HIS119 4.1 6.1 1.0
C4 A:OE21263 4.1 15.4 0.8
ND1 A:HIS94 4.2 7.0 1.0
CG A:HIS94 4.2 7.2 1.0
ND1 A:HIS96 4.2 7.4 1.0
C5 A:OE21263 4.2 11.9 0.8
CG A:HIS96 4.2 6.4 1.0
CD2 A:HIS119 4.2 5.8 1.0
CD A:GLU106 4.9 7.3 1.0
O A:HOH2102 4.9 27.8 1.0

Reference:

P.Mujumdar, K.Teruya, K.F.Tonissen, D.Vullo, C.T.Supuran, T.S.Peat, S.Poulsen. An Unusual Natural Product Primary Sulfonamide: Synthesis, Carbonic Anhydrase Inhibition and Protein X-Ray Structures of Psammaplin C. J.Med.Chem. V. 59 5462 2016.
ISSN: ISSN 0022-2623
PubMed: 27172398
DOI: 10.1021/ACS.JMEDCHEM.6B00443
Page generated: Sun Oct 27 16:48:54 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy