Zinc in PDB 3geh: Crystal Structure of Mnme From Nostoc in Complex with Gdp, Folinic Acid and Zn

The structure of Crystal Structure of Mnme From Nostoc in Complex with Gdp, Folinic Acid and Zn, PDB code: 3geh was solved by S.Meyer, A.Wittinghofer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.99 / 3.20
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	124.279, 124.279, 174.701, 90.00, 90.00, 90.00
R / Rfree (%)	24.1 / 26.7

The binding sites of Zinc atom in the Crystal Structure of Mnme From Nostoc in Complex with Gdp, Folinic Acid and Zn (pdb code 3geh). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Mnme From Nostoc in Complex with Gdp, Folinic Acid and Zn, PDB code: 3geh:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of Mnme From Nostoc in Complex with Gdp, Folinic Acid and Zn


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Mnme From Nostoc in Complex with Gdp, Folinic Acid and Zn within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn462 b:0.5 occ:1.00 OE2 A:GLU349 2.4 49.9 1.0 OE1 A:GLU349 2.7 50.1 1.0 CD A:GLU349 2.8 50.2 1.0 CG A:GLU349 4.3 50.5 1.0 CB A:GLU349 4.7 50.8 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of Mnme From Nostoc in Complex with Gdp, Folinic Acid and Zn


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Mnme From Nostoc in Complex with Gdp, Folinic Acid and Zn within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn463 b:93.6 occ:0.30 O3B A:GDP460 2.0 93.9 1.0 O2B A:GDP460 2.9 93.8 1.0 PB A:GDP460 3.0 93.5 1.0 OG A:SER235 3.1 46.4 1.0 O1B A:GDP460 3.7 93.5 1.0 CB A:SER235 4.0 46.2 1.0 O2A A:GDP460 4.3 93.6 1.0 O3A A:GDP460 4.3 93.4 1.0 N A:SER235 4.4 46.3 1.0 CE A:LYS234 4.7 46.0 1.0 PA A:GDP460 4.7 93.5 1.0 CA A:SER235 4.8 46.2 1.0 NZ A:LYS234 4.8 46.0 1.0 CB A:LYS234 4.8 46.3 1.0 O1A A:GDP460 4.9 93.0 1.0

S.Meyer, S.Bohme, A.Kruger, H.-J.Steinhoff, J.P.Klare, A.Wittinghofer. Kissing G Domains of Mnme Monitored By X-Ray Crystallography and Pulse Electron Paramagnetic Resonance Spectroscopy Plos Biol. V. 7 E1000 2009.
ISSN: ISSN 1544-9173
PubMed: 19806182
DOI: 10.1371/JOURNAL.PBIO.1000212