Zinc binding site 1 out of 6 in 3dqv
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Zinc in the PDB 3dqv. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: R: Cys53, R: Glu55, R: Cys56, R: Cys68, R: His80, R: His82, |
conact list:
Atom | Atom | Distance (A) | Zn | N R:Cys53 | 3.92 | Zn | CB R:Cys53 | 3.66 | Zn | SG R:Cys53 | 2.58 | Zn | CA R:Cys53 | 4.38 | Zn | CB R:Glu55 | 4.91 | Zn | N R:Cys56 | 4.07 | Zn | CB R:Cys56 | 3.21 | Zn | SG R:Cys56 | 2.50 | Zn | CA R:Cys56 | 4.26 | Zn | CB R:Cys68 | 3.04 | Zn | SG R:Cys68 | 2.46 | Zn | CA R:Cys68 | 4.16 | Zn | CD2 R:His80 | 4.93 | Zn | NE2 R:His82 | 4.15 | Zn | CB R:His82 | 4.11 | Zn | ND1 R:His82 | 2.41 | Zn | CD2 R:His82 | 4.43 | Zn | CE1 R:His82 | 2.98 | Zn | CG R:His82 | 3.53 |
| interactive model:
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Zinc binding site 2 out of 6 in 3dqv
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Zinc in the PDB 3dqv. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: R: Cys42, R: Ile44, R: Cys45, R: Arg46, R: Cys53, R: His80, R: Cys83, |
conact list:
Atom | Atom | Distance (A) | Zn | O R:Cys42 | 4.76 | Zn | CB R:Cys42 | 3.09 | Zn | SG R:Cys42 | 2.47 | Zn | CA R:Cys42 | 4.58 | Zn | CB R:Ile44 | 4.52 | Zn | CG2 R:Ile44 | 4.80 | Zn | C R:Ile44 | 4.65 | Zn | N R:Cys45 | 3.61 | Zn | CB R:Cys45 | 3.08 | Zn | SG R:Cys45 | 2.44 | Zn | C R:Cys45 | 4.71 | Zn | CA R:Cys45 | 3.92 | Zn | N R:Arg46 | 4.90 | Zn | CB R:Cys53 | 4.16 | Zn | CA R:Cys53 | 4.76 | Zn | NE2 R:His80 | 4.20 | Zn | N R:His80 | 4.18 | Zn | CB R:His80 | 3.50 | Zn | ND1 R:His80 | 2.47 | Zn | CD2 R:His80 | 4.17 | Zn | CE1 R:His80 | 3.29 | Zn | CG R:His80 | 3.18 | Zn | CA R:His80 | 4.47 | Zn | CB R:Cys83 | 3.00 | Zn | SG R:Cys83 | 2.51 | Zn | CA R:Cys83 | 4.50 |
| interactive model:
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Zinc binding site 3 out of 6 in 3dqv
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 3 of Zinc in the PDB 3dqv. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: R: Cys75, R: His77, R: Phe79, R: Cys94, R: Leu96, R: Asp97, R: Trp101, |
conact list:
Atom | Atom | Distance (A) | Zn | O R:Cys75 | 4.57 | Zn | N R:Cys75 | 4.98 | Zn | CB R:Cys75 | 2.79 | Zn | SG R:Cys75 | 2.35 | Zn | C R:Cys75 | 4.52 | Zn | CA R:Cys75 | 4.20 | Zn | NE2 R:His77 | 4.39 | Zn | N R:His77 | 4.66 | Zn | CB R:His77 | 3.76 | Zn | ND1 R:His77 | 2.71 | Zn | CD2 R:His77 | 4.40 | Zn | CE1 R:His77 | 3.46 | Zn | CG R:His77 | 3.45 | Zn | CA R:His77 | 4.86 | Zn | CZ R:Phe79 | 4.99 | Zn | O R:Cys94 | 4.80 | Zn | CB R:Cys94 | 3.19 | Zn | SG R:Cys94 | 2.44 | Zn | C R:Cys94 | 4.94 | Zn | CA R:Cys94 | 4.62 | Zn | CB R:Leu96 | 4.83 | Zn | N R:Asp97 | 4.51 | Zn | CB R:Asp97 | 3.94 | Zn | OD2 R:Asp97 | 3.01 | Zn | OD1 R:Asp97 | 2.33 | Zn | CG R:Asp97 | 2.80 | Zn | CA R:Asp97 | 4.80 | Zn | CZ3 R:Trp101 | 4.80 |
| interactive model:
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Zinc binding site 4 out of 6 in 3dqv
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 4 of Zinc in the PDB 3dqv. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: Y: Cys75, Y: His77, Y: Phe79, Y: Cys94, Y: Leu96, Y: Asp97, Y: Trp101, |
conact list:
Atom | Atom | Distance (A) | Zn | O Y:Cys75 | 3.88 | Zn | CB Y:Cys75 | 3.69 | Zn | SG Y:Cys75 | 3.37 | Zn | C Y:Cys75 | 4.58 | Zn | CA Y:Cys75 | 4.79 | Zn | O Y:His77 | 3.75 | Zn | NE2 Y:His77 | 4.84 | Zn | N Y:His77 | 4.52 | Zn | CB Y:His77 | 3.33 | Zn | ND1 Y:His77 | 2.79 | Zn | CD2 Y:His77 | 4.64 | Zn | C Y:His77 | 4.43 | Zn | CE1 Y:His77 | 3.88 | Zn | CG Y:His77 | 3.42 | Zn | CA Y:His77 | 4.33 | Zn | CD1 Y:Phe79 | 4.82 | Zn | CZ Y:Phe79 | 4.25 | Zn | CE1 Y:Phe79 | 3.71 | Zn | CB Y:Cys94 | 3.54 | Zn | SG Y:Cys94 | 2.46 | Zn | CA Y:Cys94 | 4.95 | Zn | CB Y:Leu96 | 4.63 | Zn | N Y:Asp97 | 4.49 | Zn | CB Y:Asp97 | 4.55 | Zn | OD2 Y:Asp97 | 4.08 | Zn | OD1 Y:Asp97 | 2.65 | Zn | CG Y:Asp97 | 3.55 | Zn | CE3 Y:Trp101 | 4.87 | Zn | CZ3 Y:Trp101 | 4.24 | Zn | CH2 Y:Trp101 | 4.98 |
| interactive model:
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Zinc binding site 5 out of 6 in 3dqv
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 5 of Zinc in the PDB 3dqv. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: Y: Cys42, Y: Ile44, Y: Cys45, Y: Arg46, Y: Cys53, Y: His80, Y: Cys83, Y: Arg86, |
conact list:
Atom | Atom | Distance (A) | Zn | N Y:Cys42 | 4.99 | Zn | CB Y:Cys42 | 2.76 | Zn | SG Y:Cys42 | 2.66 | Zn | C Y:Cys42 | 4.68 | Zn | CA Y:Cys42 | 4.23 | Zn | N Y:Ile44 | 4.62 | Zn | CB Y:Ile44 | 4.71 | Zn | C Y:Ile44 | 4.39 | Zn | CA Y:Ile44 | 4.82 | Zn | O Y:Cys45 | 4.50 | Zn | N Y:Cys45 | 3.44 | Zn | CB Y:Cys45 | 3.08 | Zn | SG Y:Cys45 | 2.55 | Zn | C Y:Cys45 | 4.07 | Zn | CA Y:Cys45 | 3.69 | Zn | N Y:Arg46 | 4.51 | Zn | CB Y:Cys53 | 4.04 | Zn | CA Y:Cys53 | 4.99 | Zn | NE2 Y:His80 | 3.77 | Zn | N Y:His80 | 4.50 | Zn | CB Y:His80 | 4.04 | Zn | ND1 Y:His80 | 4.87 | Zn | CD2 Y:His80 | 2.75 | Zn | CE1 Y:His80 | 4.90 | Zn | CG Y:His80 | 3.68 | Zn | CA Y:His80 | 4.93 | Zn | CB Y:Cys83 | 3.43 | Zn | SG Y:Cys83 | 2.66 | Zn | CA Y:Cys83 | 4.86 | Zn | NH2 Y:Arg86 | 4.62 |
| interactive model:
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Zinc binding site 6 out of 6 in 3dqv
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 6 of Zinc in the PDB 3dqv. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: Y: Cys53, Y: Glu55, Y: Cys56, Y: Cys68, Y: His82, |
conact list:
Atom | Atom | Distance (A) | Zn | N Y:Cys53 | 4.31 | Zn | CB Y:Cys53 | 4.43 | Zn | SG Y:Cys53 | 3.14 | Zn | CA Y:Cys53 | 4.95 | Zn | CB Y:Glu55 | 4.43 | Zn | C Y:Glu55 | 4.73 | Zn | CA Y:Glu55 | 4.99 | Zn | N Y:Cys56 | 3.77 | Zn | CB Y:Cys56 | 3.26 | Zn | SG Y:Cys56 | 2.69 | Zn | CA Y:Cys56 | 4.14 | Zn | N Y:Cys68 | 4.88 | Zn | CB Y:Cys68 | 3.33 | Zn | SG Y:Cys68 | 2.98 | Zn | CA Y:Cys68 | 4.05 | Zn | NE2 Y:His82 | 4.44 | Zn | CB Y:His82 | 4.36 | Zn | ND1 Y:His82 | 2.98 | Zn | CD2 Y:His82 | 4.66 | Zn | CE1 Y:His82 | 3.46 | Zn | CG Y:His82 | 3.86 |
| interactive model:
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