Zinc in PDB 1v87: Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2

The binding sites of Zinc atom in the Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2 (pdb code 1v87). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2, PDB code: 1v87:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 SG A:CYS69 2.3 0.0 1.0 SG A:CYS28 2.3 0.0 1.0 ND1 A:HIS66 2.3 0.0 1.0 SG A:CYS31 2.3 0.0 1.0 HB2 A:HIS66 2.7 0.0 1.0 CG A:HIS66 3.1 0.0 1.0 HB3 A:CYS28 3.1 0.0 1.0 CE1 A:HIS66 3.2 0.0 1.0 HB3 A:CYS31 3.2 0.0 1.0 CB A:CYS28 3.2 0.0 1.0 CB A:HIS66 3.4 0.0 1.0 CB A:CYS31 3.4 0.0 1.0 HB2 A:CYS28 3.4 0.0 1.0 H A:CYS31 3.5 0.0 1.0 HB2 A:CYS69 3.5 0.0 1.0 HE1 A:HIS66 3.5 0.0 1.0 CB A:CYS69 3.5 0.0 1.0 HB A:ILE30 3.5 0.0 1.0 H A:GLY40 3.7 0.0 1.0 HB3 A:CYS69 3.8 0.0 1.0 H A:HIS66 3.8 0.0 1.0 HA A:SER39 3.8 0.0 1.0 HB3 A:HIS66 4.0 0.0 1.0 N A:CYS31 4.0 0.0 1.0 OG A:SER39 4.1 0.0 1.0 CD2 A:HIS66 4.1 0.0 1.0 NE2 A:HIS66 4.1 0.0 1.0 HB2 A:CYS31 4.2 0.0 1.0 CA A:CYS31 4.3 0.0 1.0 HB2 A:SER39 4.4 0.0 1.0 HD12 A:ILE30 4.4 0.0 1.0 HB2 A:GLU33 4.5 0.0 1.0 HG22 A:ILE30 4.5 0.0 1.0 N A:HIS66 4.5 0.0 1.0 HD1 A:TYR41 4.6 0.0 1.0 CB A:ILE30 4.6 0.0 1.0 CB A:SER39 4.6 0.0 1.0 CA A:HIS66 4.6 0.0 1.0 N A:GLY40 4.6 0.0 1.0 CA A:SER39 4.6 0.0 1.0 CA A:CYS28 4.7 0.0 1.0 H A:CYS69 4.7 0.0 1.0 H A:GLU33 4.7 0.0 1.0 HD21 A:LEU35 4.9 0.0 1.0 HG A:SER39 4.9 0.0 1.0 CA A:CYS69 4.9 0.0 1.0 HD1 A:PHE65 4.9 0.0 1.0 C A:ILE30 4.9 0.0 1.0 H A:ILE30 5.0 0.0 1.0 HE2 A:HIS66 5.0 0.0 1.0 HD2 A:HIS66 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 ND1 A:HIS63 2.3 0.0 1.0 SG A:CYS61 2.3 0.0 1.0 SG A:CYS88 2.3 0.0 1.0 SG A:CYS85 2.3 0.0 1.0 H A:CYS88 2.7 0.0 1.0 HB3 A:SER87 2.8 0.0 1.0 HB2 A:HIS63 2.9 0.0 1.0 CG A:HIS63 3.0 0.0 1.0 CE1 A:HIS63 3.1 0.0 1.0 HB3 A:CYS85 3.1 0.0 1.0 CB A:CYS85 3.2 0.0 1.0 CB A:HIS63 3.4 0.0 1.0 HE1 A:HIS63 3.4 0.0 1.0 HB3 A:CYS88 3.5 0.0 1.0 HB2 A:CYS85 3.5 0.0 1.0 HB2 A:CYS61 3.5 0.0 1.0 CB A:CYS61 3.5 0.0 1.0 CB A:CYS88 3.5 0.0 1.0 N A:CYS88 3.6 0.0 1.0 HD12 A:LEU58 3.7 0.0 1.0 HB3 A:CYS61 3.8 0.0 1.0 HB3 A:HIS63 3.8 0.0 1.0 HE2 A:PHE65 3.8 0.0 1.0 CB A:SER87 3.8 0.0 1.0 CD2 A:HIS63 3.9 0.0 1.0 NE2 A:HIS63 3.9 0.0 1.0 HD13 A:LEU58 4.0 0.0 1.0 H A:SER87 4.1 0.0 1.0 CA A:CYS88 4.1 0.0 1.0 HG A:SER87 4.1 0.0 1.0 CD1 A:LEU58 4.2 0.0 1.0 OG A:SER87 4.3 0.0 1.0 HD11 A:LEU58 4.3 0.0 1.0 HH A:TYR92 4.4 0.0 1.0 HB2 A:CYS88 4.4 0.0 1.0 HB2 A:SER87 4.4 0.0 1.0 HB A:THR90 4.5 0.0 1.0 H A:LYS89 4.5 0.0 1.0 C A:SER87 4.5 0.0 1.0 CA A:SER87 4.6 0.0 1.0 H A:HIS63 4.6 0.0 1.0 H A:THR90 4.6 0.0 1.0 CA A:CYS85 4.7 0.0 1.0 HE2 A:HIS63 4.7 0.0 1.0 CE2 A:PHE65 4.8 0.0 1.0 N A:SER87 4.8 0.0 1.0 CA A:HIS63 4.8 0.0 1.0 HD2 A:HIS63 4.8 0.0 1.0 CA A:CYS61 4.9 0.0 1.0 H A:CYS61 4.9 0.0 1.0 HA A:CYS88 5.0 0.0 1.0 N A:HIS63 5.0 0.0 1.0 C A:CYS88 5.0 0.0 1.0

K.Miyamoto, Y.Muto, N.Tochio, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama. Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2 To Be Published.