Zinc in PDB, part 249 (files: 9921-9960),
PDB 4v3l-4wh6
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 9921-9960 (PDB 4v3l-4wh6).
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4v3l (Zn: 2) - RNF38-Ub-UBCH5B-Ub Complex
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4v3u (Zn: 2) - Structure of Human Nnos R354A G357D Mutant Heme Domain in Complex with N-2-(2-(1H-Imidazol-1-Yl)Pyrimidin-4-Yl)Ethyl- 3-(Pyridin-3-Yl)Propan-1-Amine
Other atoms:
Fe (4);
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4v3v (Zn: 1) - Structure of Rat Neuronal Nitric Oxide Synthase Heme Domain in Complex with N-(2-(1H-Imidazol-1-Yl)-4-Pyrimidylmethyl)- 3-(3-Fluorophenyl)Propan-1-Amine
Other atoms:
F (2);
Fe (2);
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4v3w (Zn: 1) - Structure of Rat Neuronal Nitric Oxide Synthase Heme Domain in Complex with 2-(2-(1H-Imidazol-1-Yl)Pyrimidin-4-Yl)-N-( 3-Fluorophenethyl)Ethan-1-Amine
Other atoms:
F (2);
Fe (2);
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4v3x (Zn: 1) - Structure of Rat Neuronal Nitric Oxide Synthase Heme Domain in Complex with N-2-(2-(1H-Imidazol-1-Yl)Pyrimidin-4-Yl) Ethyl-3-(3-Fluorophenyl)Propan-1-Amine
Other atoms:
F (2);
Fe (2);
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4v3y (Zn: 1) - Structure of Rat Neuronal Nitric Oxide Synthase Heme Domain in Complex with N-2-(2-(1H-Imidazol-1-Yl)Pyrimidin-4-Yl) Ethyl-3-(3-Chlorophenyl)Propan-1-Amine
Other atoms:
Fe (2);
Cl (2);
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4v3z (Zn: 1) - Structure of Rat Neuronal Nitric Oxide Synthase Heme Domain in Complex with 2-(2-(1H-Imidazol-1-Yl)Pyrimidin-4-Yl)-N-( 2-(3-Fluorophenyl)Cyclopropylmethyl)Ethan-1-Amine
Other atoms:
F (2);
Fe (2);
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4w1o (Zn: 8) - PDE4D Complexed with Inhibitor
Other atoms:
Cl (8);
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4w2r (Zn: 14) - Structure of Hs/ACPRC2 in Complex with 5,8-Dichloro-2-[(4-Methoxy-6- Methyl-2-Oxo-1,2-Dihydropyridin-3-Yl)Methyl]-7-[(R)-Methoxy(Oxetan-3- Yl)Methyl]-3,4-Dihydroisoquinolin-1(2H)-One
Other atoms:
Cl (4);
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4w4o (Zn: 6) - High-Resolution Crystal Structure of Fc Bound to Its Human Receptor Fc-Gamma-Ri
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4w4u (Zn: 13) - Structure of Yeast Saga Dubm with SGF73 Y57A Mutant at 2.8 Angstroms Resolution
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4w5a (Zn: 9) - Complex Structure of Atrx Add Bound to H3K9ME3S10PH Peptide
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4w5i (Zn: 2) - Crystal Structure of Human Tankyrase 2 in Complex with 1-Methyl-7- Phenyl-1,2,3,4,5,6-Hexahydro-1,6- Naphthyridin-5-One
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4w5s (Zn: 1) - Tankyrase in Complex with Compound
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4w6e (Zn: 1) - Human Tankyrase 1 with Small Molecule Inhibitor
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4w6z (Zn: 8) - Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme
Other atoms:
F (12);
I (2);
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4w74 (Zn: 6) - Crystal Structure of Full-Length Split Gfp Mutant E115C/T118H with Metal Mediated Crystal Contacts, P 1 21 1 Space Group
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4w8y (Zn: 2) - Structure of Full Length CMR2 From Pyrococcus Furiosus (Manganese Bound Form)
Other atoms:
Mn (8);
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4w9y (Zn: 2) - X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Glutamyl Sulfamide Inhibitor CJC47
Other atoms:
Ca (1);
Cl (1);
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4wa6 (Zn: 15) - Structure of Yeast Saga Dubm with SGF73 N59D Mutant at 2.36 Angstroms Resolution
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4wai (Zn: 4) - Structural Characterization of the Late Competence Protein Comfb From Bacillus Subtilis.
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4waj (Zn: 2) - H. Influenzae Beta-Carbonic Anhydase Variant P48S/A49P
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4wak (Zn: 2) - H. Influenzae Beta-Carbonic Anhydrase Variant W39V/G41A
Other atoms:
K (1);
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4wam (Zn: 2) - H. Influenzae Beta-Carbonic Anhydrase Variant W39V/G41A/P48S/A49P
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4wb7 (Zn: 15) - Crystal Structure of A Chimeric Fusion of Human Dnaj (HSP40) and Camp- Dependent Protein Kinase A (Catalytic Alpha Subunit)
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4wbg (Zn: 7) - Crystal Structure of Class C Beta-Lactamase Mox-1 Covalently Complexed with Aztorenam
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4wcj (Zn: 1) - Structure of Icab From Ammonifex Degensii
Other atoms:
Cl (1);
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4wcl (Zn: 3) - Crystal Structure of Product Bound Cell Shape Determinant Protein CSD4 From Helicobacter Pylori
Other atoms:
I (33);
Na (1);
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4wcm (Zn: 4) - Crystal Structure of Cell Shape Determinant Protein CSD4 GLN46HIS Variant From Helicobacter Pylori
Other atoms:
I (43);
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4wcn (Zn: 1) - Crystal Structure of Tripeptide Bound Cell Shape Determinant CSD4 Protein From Helicobacter Pylori
Other atoms:
I (44);
Na (2);
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4wco (Zn: 7) - Crystal Structure of Extracellular Domain of Human Lectin-Like Transcript 1 (LLT1), the Ligand For Natural Killer Receptor-P1A
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4wcu (Zn: 4) - PDE4 Complexed with Inhibitor
Other atoms:
Mg (4);
Cl (8);
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4wd6 (Zn: 4) - Crystal Structure of Dim-1 Metallo-Beta-Lactamase
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4wd7 (Zn: 15) - Crystal Structure of A Bacterial Bestrophin Homolog From Klebsiella Pneumoniae By Zn-Sad Phasing
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4wd8 (Zn: 15) - Crystal Structure of A Bacterial Bestrophin Homolog From Klebsiella Pneumoniae
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4wec (Zn: 2) - Crystal Structure of A Short Chain Dehydrogenase From Mycobacterium Smegmatis
Other atoms:
Mg (4);
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4wf6 (Zn: 1) - Anthrax Toxin Lethal Factor with Bound Small Molecule Inhibitor Mk-31
Other atoms:
F (1);
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4wf8 (Zn: 1) - Crystal Structure of NS3/4A Protease in Complex with Asunaprevir
Other atoms:
Cl (2);
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4wgk (Zn: 2) - Crystal Structure of Human Neutral Ceramidase with Zn-Bound Phosphate
Other atoms:
Ca (2);
Cl (1);
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4wh6 (Zn: 1) - Crystal Structure of Hcv NS3/4A Protease Variant R155K in Complex with Asunaprevir
Other atoms:
Cl (1);
Page generated: Mon Dec 15 11:33:41 2025
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