Zinc in PDB, part 127 (files: 5041-5080),
PDB 3d4b-3dcs
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 5041-5080 (PDB 3d4b-3dcs).
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3d4b (Zn: 1) - Crystal Structure of SIR2TM in Complex with Acetyl P53 Peptide and Dadme-Nad+
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3d4u (Zn: 1) - Bovine Thrombin-Activatable Fibrinolysis Inhibitor (Tafia) in Complex with Tick-Derived Carboxypeptidase Inhibitor.
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3d4y (Zn: 1) - Golgi Mannosidase II Complex with Mannoimidazole
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3d4z (Zn: 1) - Golgi Mannosidase II Complex with Gluco-Imidazole
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3d50 (Zn: 1) - Golgi Mannosidase II Complex with N-Octyl-6-Epi-Valienamine
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3d51 (Zn: 1) - Golgi Mannosidase II Complex with Gluco-Hydroxyiminolactam
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3d52 (Zn: 1) - Golgi Mannosidase II Complex with An N-Aryl Carbamate Derivative of Gluco-Hydroxyiminolactam
Other atoms:
Cl (2);
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3d66 (Zn: 3) - Crystal Structure of Thrombin-Activatable Fibrinolysis Inhibitor (Tafi)
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3d67 (Zn: 3) - Crystal Structure of Thrombin-Activatable Fibrinolysis Inhibitor (Tafi) in Complex with 2-Guanidino-Ethyl- Mercaptosuccinic Acid (Gemsa)
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3d68 (Zn: 3) - Crystal Structure of A T325I/T329I/H333Y/H335Q Mutant of Thrombin-Activatable Fibrinolysis Inhibitor (Tafi-Iiyq)
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3d6n (Zn: 1) - Crystal Structure of Aquifex Dihydroorotase Activated By Aspartate Transcarbamoylase
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3d71 (Zn: 1) - Crystal Structure of E253Q Bmrr Bound to 22 Base Pair Promoter Site
Other atoms:
F (3);
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3d7d (Zn: 2) - A High Resolution Crystal Structure of Human Glutamate Carboxypeptidase II (Gcpii) in A Complex with Dcfbd, A Urea-Based Inhibitor
Other atoms:
F (1);
Cl (1);
Ca (1);
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3d7f (Zn: 2) - A High Resolution Crystal Structure of Human Glutamate Carboxypeptidase II (Gcpii) in A Complex with Dcit, A Urea- Based Inhibitor
Other atoms:
I (1);
Cl (1);
Ca (1);
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3d7g (Zn: 2) - A High Resolution Crystal Structure of Human Glutamate Carboxypeptidase II (Gcpii) in A Complex with Dcmc, A Urea- Based Inhibitor
Other atoms:
Cl (1);
Ca (1);
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3d7h (Zn: 2) - A High Resolution Crystal Structure of Human Glutamate Carboxypeptidase II (Gcpii) in A Complex with Dcibzl, A Urea-Based Inhibitor
Other atoms:
I (1);
Cl (1);
Ca (1);
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3d7s (Zn: 2) - Crystal Structure of Wild-Type E. Coli Asparate Transcarbamoylase at pH 8.5 at 2.80 A Resolution
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3d7v (Zn: 4) - Crystal Structure of Mcl-1 in Complex with An Mcl-1 Selective BH3 Ligand
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3d81 (Zn: 1) - SIR2-S-Alkylamidate Complex Crystal Structure
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3d8c (Zn: 1) - Factor Inhibiting Hif-1 Alpha D201G Mutant in Complex with Zn(II), Alpha-Ketoglutarate and Hif-1 Alpha 19MER
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3d8w (Zn: 1) - Use of A Carbonic Anhydrase II, IX Active-Site Mimic, For the Purpose of Screening Inhibitors For Possible Anti- Cancer Properties
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3d92 (Zn: 1) - Human Carbonic Anhydrase II Bound with Substrate Carbon Dioxide
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3d9t (Zn: 2) - CIAP1-BIR3 in Complex with N-Terminal Peptide From Caspase- 9 (Atpfqe)
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3d9u (Zn: 1) - The BIR3 Domain of CIAP1 in Complex with the N Terminal Peptide From Smac/Diablo (Avpiaq).
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3d9z (Zn: 1) - Use of Carbonic Anhydrase II, IX Active-Site Mimic, For the Purpose of Screening Inhibitors For Possible Anti-Cancer Properties
Other atoms:
Cl (1);
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3da2 (Zn: 2) - X-Ray Structure of Human Carbonic Anhydrase 13 in Complex with Inhibitor
Other atoms:
Cl (4);
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3daz (Zn: 1) - Use of Carbonic Anhydrase II, IX Active-Site Mimic, For the Purpose of Screening Inhibitors For Possible Anti-Cancer Properties
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3dbh (Zn: 4) - Structural Dissection of A Gating Mechanism Preventing Misactivation of Ubiquitin By NEDD8'S E1 (APPBP1- UBA3ARG190ALA-NEDD8ALA72ARG)
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3dbk (Zn: 1) - Pseudomonas Aeruginosa Elastase with Phosphoramidon
Other atoms:
Ca (1);
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3dbl (Zn: 4) - Structural Dissection of A Gating Mechanism Preventing Misactivation of Ubiquitin By NEDD8'S E1 (APPBP1- UBA3ARG190WT-NEDD8ALA72GLN)
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3dbr (Zn: 4) - Structural Dissection of A Gating Mechanism Preventing Misactivation of Ubiquitin By NEDD8'S E1 (APPBP1- UBA3ARG190GLN-NEDD8ALA72ARG)
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3dbu (Zn: 1) - Use of Carbonic Anhydrase II, IX Active-Site Mimic, For the Purpose of Screening Inhibitors For Possible Anti-Cancer Properties
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3dc3 (Zn: 1) - Use of Carbonic Anhydrase II, IX Active-Site Mimic, For the Purpose of Screening Inhibitors For Possible Anti-Cancer Properties
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3dc8 (Zn: 4) - Crystal Structure of Dihydropyrimidinase From Sinorhizobium Meliloti
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3dc9 (Zn: 1) - Use of Carbonic Anhydrase II, IX Active-Site Mimic, For the Purpose of Screening Inhibitors For Possible Anti-Cancer Properties
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3dcc (Zn: 1) - Use of Carbonic Anhydrase II, IX Active-Site Mimic, For the Purpose of Screening Inhibitors For Possible Anti-Cancer Properties
Other atoms:
Cl (1);
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3dci (Zn: 1) - The Structure of A Putative Arylesterase From Agrobacterium Tumefaciens Str. C58
Other atoms:
Cl (22);
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3dco (Zn: 1) - Drosophila Nod (3DC4) and Bovine Tubulin (1JFF) Docked Into the 11-Angstrom Cryo-Em Map of Nucleotide-Free Nod Complexed to the Microtubule
Other atoms:
Mg (2);
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3dcp (Zn: 3) - Crystal Structure of the Putative Histidinol Phosphatase Hisk From Listeria Monocytogenes. Northeast Structural Genomics Consortium Target LMR141.
Other atoms:
Fe (6);
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3dcs (Zn: 1) - Use of Carbonic Anhydrase II, IX Active-Site Mimic, For the Purpose of Screening Inhibitors For Possible Anti-Cancer Properties
Page generated: Mon Dec 15 11:29:01 2025
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