Zinc in PDB, part 561 (files: 22401-22440),
PDB 9g4t-9gn7
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 22401-22440 (PDB 9g4t-9gn7).
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9g4t (Zn: 1) - Beta Carbonic Anhydrase Csosca From the Halothiobacillus Neapolitanus Alpha-Carboxysome
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9g5b (Zn: 1) - Assembly Intermediate of Human Mitochondrial Ribosome Small Subunit (State A)
Other atoms:
Mg (12);
Fe (4);
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9g5c (Zn: 1) - Assembly Intermediate of Human Mitochondrial Ribosome Small Subunit (State B)
Other atoms:
Fe (4);
Mg (23);
K (4);
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9g5d (Zn: 1) - Assembly Intermediate of Human Mitochondrial Ribosome Small Subunit (State C)
Other atoms:
Fe (4);
K (1);
Mg (10);
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9g5e (Zn: 1) - Translation-Initiation State of Human Mitochondrial Ribosome Small Subunit (State F)
Other atoms:
Mg (45);
K (1);
Fe (4);
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9g5j (Zn: 4) - Structure of the Pro-Pro Endopeptidase (Ppep-3) E153A Y189F in Complex with Substrate Peptide Ac-Eplpppp-NH2 From Geobacillus Thermodenitrificans
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9g8t (Zn: 1) - Crystal Structure of the Persulfide Dioxygenase (Pdo - PA2915) From Pseudomonas Aeruginosa
Other atoms:
Cl (2);
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9g95 (Zn: 1) - Lipid III Flippase Wzxe with NB10 Nanobody in Outward-Facing Conformation at 2.7552 A
Other atoms:
Cl (2);
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9g97 (Zn: 1) - Lipid III Flippase Wzxe with NB10 Nanobody in Outward-Facing Conformation at 0.9688 A
Other atoms:
Cl (3);
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9g9u (Zn: 2) - The Structure of Xynx, A NIF3 Family Protein From Geobacillus Proteiniphilus T-6
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9ga2 (Zn: 3) - MTUVRA2 Dimer Empty
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9ga4 (Zn: 4) - MTUVRA2UVRB2 Bound to Damaged Oligonucleotide
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9ga5 (Zn: 4) - MTUVRA2 Bound to Endogenous E. Coli Dna
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9gaw (Zn: 6) - High-Resolution Structure of the Anaphase-Promoting Complex/Cyclosome (Apc/C) Bound to Co-Activator CDH1
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9gbf (Zn: 8) - X-Ray Structure of PHDVC5HCH Tandem Domain of NSD2
Other atoms:
Na (2);
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9gbo (Zn: 1) - Human Angiotensin-1 Converting Enzyme C-Domain in Complex with A Diprolyl Inhibitor- SG16
Other atoms:
Cl (2);
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9gce (Zn: 3) - Ang-1 Domain of the Hupe/Urej-2 Protein From Rhodobacteraceae Bacterium Rbang-1A with Cu Bound
Other atoms:
Cu (1);
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9gd5 (Zn: 4) - Crystal Structure of Apo TRIM24 Phd-Brd in C121 Space Group
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9gda (Zn: 5) - Rnap-Topoi Complex on Duplex Scaffold
Other atoms:
Mg (1);
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9ges (Zn: 8) - Crystal Structure of HEI10
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9ggm (Zn: 2) - Cryo-Em Structure of KBTBD4 P313PRR Mutant-HDAC2 2:2 Complex
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9gi8 (Zn: 20) - Solution Structure of Homodimeric TMEM106B
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9gjt (Zn: 2) - Structure of Nipah Virus Rna Polymerase Complex - Apo State
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9gju (Zn: 2) - Structure of Replicating Nipah Virus Rna Polymerase Complex - Rna- Bound State
Other atoms:
Mg (1);
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9gku (Zn: 8) - Crystal Structure of Propanil Hydrolase (Prph) From Sphingomonas Sp. Y57
Other atoms:
K (8);
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9gkv (Zn: 2) - Crystal Structure of Deacetylase (Hdah) From Vibrio Cholerae in Complex with Saha
Other atoms:
K (8);
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9gkw (Zn: 4) - Crystal Structure of Dimethoate Hydrolase (Dmha) of Rhizorhabdus Wittichii in Complex with Octanoic Acid
Other atoms:
K (10);
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9gkx (Zn: 4) - Crystal Structure of Rhizorhabdus Wittichii Dimethoate Hydrolase (Dmha) in Complex with Saha
Other atoms:
K (4);
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9gky (Zn: 2) - Crystal Structure of Histone Deacetylase (Hdah) From Vibrio Cholerae in Complex with Decanoic Acid
Other atoms:
Na (2);
K (9);
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9gkz (Zn: 2) - Crystal Structure of Acetylpolyamine Amidohydrolase (Apah) From Pseudomonas Sp. M30-35
Other atoms:
K (6);
Cl (1);
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9gl0 (Zn: 4) - Crystal Structure of Acetylpolyamine Aminohydrolase (Apah) From Legionella Pneumophila
Other atoms:
K (2);
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9gl1 (Zn: 1) - Crystal Structure of Acetylpolyamine Aminohydrolase (Apah) From Legionella Cherrii
Other atoms:
K (2);
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9glb (Zn: 1) - Crystal Structure of Deacetylase (Hdah) From Klebsiella Pneumoniae Subsp. Ozaenae
Other atoms:
K (3);
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9gle (Zn: 2) - Jumonji Domain-Containing Protein 2A with Crystallization Epitope Mutations A91T:T93S
Other atoms:
Ni (2);
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9gm3 (Zn: 1) - Crystal Structure of the Complex Formed Between the Radical Sam Protein Chlb and the Leader Region of Its Precursor Substrate Chla
Other atoms:
Fe (16);
-
9gmw (Zn: 2) - SLFN11 Wt Dimer Bound to Trna-Leu-Taa (Pre-Cleavage State)
Other atoms:
Mg (4);
Mn (3);
-
9gmx (Zn: 2) - SLFN11 Wt Dimer Bound to Trna-Leu-Taa (Post-Cleavage State)
Other atoms:
Mg (4);
Mn (2);
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9gn1 (Zn: 2) - Crystal Structure of Inactive Deacetylase (Hdah) H144A From Klebsiella Pneumoniae Subsp. Ozaenae
Other atoms:
K (2);
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9gn6 (Zn: 1) - Crystal Structure of Deacetylase (Hdah) From Klebsiella Pneumoniae Subsp. Ozaenae in Complex with the Inhibitor Saha
Other atoms:
K (2);
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9gn7 (Zn: 1) - Crystal Structure of Deacetylase (Hdah) From Klebsiella Pneumoniae Subsp. Ozaenae in Complex with the Inhibitor Tsa
Other atoms:
K (2);
Page generated: Mon Dec 15 11:45:47 2025
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