Zinc in PDB, part 559 (files: 22321-22360),
PDB 9g24-9gkx
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 22321-22360 (PDB 9g24-9gkx).
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9g24 (Zn: 6) - Yeast Rna Polymerase I Elongation Complex Stalled By An Apurinic Site Bound to Nucleotide Analog Ampcpp at E-Site
Other atoms:
Mg (1);
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9g25 (Zn: 1) - SNR30 Snornp - State 1 - UTP23-KRR1-DELTAC3
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9g26 (Zn: 6) - Yeast Rna Polymerase I Elongation Complex Stalled By An Apurinic Site, Closed State
Other atoms:
Mg (1);
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9g27 (Zn: 6) - Yeast Rna Polymerase I Elongation Complex Stalled By An Apurinic Site, Pre-Translocation State
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9g29 (Zn: 7) - Yeast Rna Polymerase I Elongation Complex Stalled By An Apurinic Site with the C-Terminal of A12 in the Funnel
Other atoms:
Mg (1);
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9g2b (Zn: 6) - Yeast Rna Polymerase I Elongation Complex Stalled By An Apurinic Site, 12-Subunit
Other atoms:
Mg (1);
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9g2c (Zn: 4) - Yeast Rna Polymerase I Elongation Complex Stalled By An Apurinic Site, Open State
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9g2k (Zn: 1) - Cryo-Em Structure of Irtab in Outward-Occluded State in Nanodisc in Complex with Adp-Vanadate
Other atoms:
V (2);
Mg (2);
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9g2l (Zn: 1) - Cryo-Em Structure of Irtab in Inward-Facing State in Lmng
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9g2m (Zn: 1) - Cryo-Em Structure of Irtab in Outward-Occluded State in Lmng in Complex with Adp-Vanadate
Other atoms:
V (2);
Mg (2);
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9g2p (Zn: 1) - Cryo-Em Structure of Irtab 2XEQ Mutant in Outward-Occluded State in Nanodisc
Other atoms:
Mg (2);
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9g2v (Zn: 1) - Cryo-Em Structure of Irtab in Inward-Facing State in Presence of Mycobactin Under Turnover Conditions in Lmng
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9g2x (Zn: 1) - Cryo-Em Structure of Irtab in Outward-Occluded State in Presence of Mycobactin Under Turnover Conditions in Lmng
Other atoms:
Mg (2);
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9g2z (Zn: 1) - Cryo-Em Structure of Irtab in Outward-Occluded State Under Turnover Conditions in Lmng
Other atoms:
Mg (2);
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9g3t (Zn: 2) - Structure of the Pro-Pro Endopeptidase (Ppep-3) E153A Y189F From Geobacillus Thermodenitrificans
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9g4a (Zn: 3) - Structure of Human SETD2 T1663M Mutant in Complex with Sam and H3K36M Peptide
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9g4t (Zn: 1) - Beta Carbonic Anhydrase Csosca From the Halothiobacillus Neapolitanus Alpha-Carboxysome
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9g5b (Zn: 1) - Assembly Intermediate of Human Mitochondrial Ribosome Small Subunit (State A)
Other atoms:
Mg (12);
Fe (4);
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9g5c (Zn: 1) - Assembly Intermediate of Human Mitochondrial Ribosome Small Subunit (State B)
Other atoms:
Fe (4);
Mg (23);
K (4);
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9g5d (Zn: 1) - Assembly Intermediate of Human Mitochondrial Ribosome Small Subunit (State C)
Other atoms:
Fe (4);
K (1);
Mg (10);
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9g5e (Zn: 1) - Translation-Initiation State of Human Mitochondrial Ribosome Small Subunit (State F)
Other atoms:
Mg (45);
K (1);
Fe (4);
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9g5j (Zn: 4) - Structure of the Pro-Pro Endopeptidase (Ppep-3) E153A Y189F in Complex with Substrate Peptide Ac-Eplpppp-NH2 From Geobacillus Thermodenitrificans
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9g8t (Zn: 1) - Crystal Structure of the Persulfide Dioxygenase (Pdo - PA2915) From Pseudomonas Aeruginosa
Other atoms:
Cl (2);
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9g95 (Zn: 1) - Lipid III Flippase Wzxe with NB10 Nanobody in Outward-Facing Conformation at 2.7552 A
Other atoms:
Cl (2);
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9g97 (Zn: 1) - Lipid III Flippase Wzxe with NB10 Nanobody in Outward-Facing Conformation at 0.9688 A
Other atoms:
Cl (3);
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9g9u (Zn: 2) - The Structure of Xynx, A NIF3 Family Protein From Geobacillus Proteiniphilus T-6
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9ga2 (Zn: 3) - MTUVRA2 Dimer Empty
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9ga4 (Zn: 4) - MTUVRA2UVRB2 Bound to Damaged Oligonucleotide
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9ga5 (Zn: 4) - MTUVRA2 Bound to Endogenous E. Coli Dna
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9gaw (Zn: 6) - High-Resolution Structure of the Anaphase-Promoting Complex/Cyclosome (Apc/C) Bound to Co-Activator CDH1
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9gbf (Zn: 8) - X-Ray Structure of PHDVC5HCH Tandem Domain of NSD2
Other atoms:
Na (2);
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9gbo (Zn: 1) - Human Angiotensin-1 Converting Enzyme C-Domain in Complex with A Diprolyl Inhibitor- SG16
Other atoms:
Cl (2);
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9gd5 (Zn: 4) - Crystal Structure of Apo TRIM24 Phd-Brd in C121 Space Group
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9ggm (Zn: 2) - Cryo-Em Structure of KBTBD4 P313PRR Mutant-HDAC2 2:2 Complex
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9gjt (Zn: 2) - Structure of Nipah Virus Rna Polymerase Complex - Apo State
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9gju (Zn: 2) - Structure of Replicating Nipah Virus Rna Polymerase Complex - Rna- Bound State
Other atoms:
Mg (1);
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9gku (Zn: 8) - Crystal Structure of Propanil Hydrolase (Prph) From Sphingomonas Sp. Y57
Other atoms:
K (8);
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9gkv (Zn: 2) - Crystal Structure of Deacetylase (Hdah) From Vibrio Cholerae in Complex with Saha
Other atoms:
K (8);
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9gkw (Zn: 4) - Crystal Structure of Dimethoate Hydrolase (Dmha) of Rhizorhabdus Wittichii in Complex with Octanoic Acid
Other atoms:
K (10);
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9gkx (Zn: 4) - Crystal Structure of Rhizorhabdus Wittichii Dimethoate Hydrolase (Dmha) in Complex with Saha
Other atoms:
K (4);
Page generated: Sat Aug 23 07:00:00 2025
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