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Zinc in PDB, part 56 (files: 2201-2240), PDB 1y2d-1yec

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 2201-2240 (PDB 1y2d-1yec).
  1. 1y2d (Zn: 2) - Catalytic Domain of Human Phosphodiesterase 4D in Complex with 1-(4-Methoxy-Phenyl)-3,5-Dimethyl-1H-Pyrazole-4- Carboxylic Acid Ethyl Ester
    Other atoms: Mg (2);
  2. 1y2e (Zn: 2) - Catalytic Domain of Human Phosphodiesterase 4D in Complex with 1-(4-Amino-Phenyl)-3,5-Dimethyl-1H-Pyrazole-4- Carboxylic Acid Ethyl Ester
    Other atoms: Mg (2);
  3. 1y2h (Zn: 2) - Catalytic Domain of Human Phosphodiesterase 4B in Complex with 1-(2-Chloro-Phenyl)-3,5-Dimethyl-1H-Pyrazole-4- Carboxylic Acid Ethyl Ester
    Other atoms: Mg (2); Cl (2);
  4. 1y2j (Zn: 2) - Catalytic Domain of Human Phosphodiesterase 4B in Complex with 3,5-Dimethyl-1-(3-Nitro-Phenyl)-1H-Pyrazole-4- Carboxylic Acid Ethyl Ester
    Other atoms: Mg (2);
  5. 1y2k (Zn: 2) - Catalytic Domain of Human Phosphodiesterase 4D in Complex with 3,5-Dimethyl-1-(3-Nitro-Phenyl)-1H-Pyrazole-4- Carboxylic Acid Ethyl Ester
    Other atoms: Mg (2);
  6. 1y3g (Zn: 1) - Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin
    Other atoms: Si (1); Ca (4);
  7. 1y44 (Zn: 2) - Crystal Structure of Rnase Z
  8. 1y5v (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) in Complex with 6-Amino- 4-(2-Phenylethyl)-1,7-Dihydro-8H-Imidazo[4,5-G]Quinazolin- 8-One
  9. 1y5w (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) in Complex with 6-Amino- 4-[2-(4-Methylphenyl)Ethyl]-1,7-Dihydro-8H-Imidazo[4,5- G]Quinazolin-8-One
  10. 1y5x (Zn: 2) - Trna-Guanine Transglycosylase (Tgt) in Complex with 6-Amino- 4-[2-(4-Methoxyphenyl)Ethyl]-1,7-Dihydro-8H-Imidazo[4,5- G]Quinazolin-8-One
  11. 1y6h (Zn: 2) - Crystal Structure of Lipdf
  12. 1y75 (Zn: 2) - A New Form of Catalytically Inactive Phospholipase A2 with An Unusual Disulphide Bridge Cys 32- Cys 49 Reveals Recognition For N-Acetylglucosmine
  13. 1y77 (Zn: 8) - Complete Rna Polymerase II Elongation Complex with Substrate Analogue Gmpcpp
    Other atoms: Mg (1);
  14. 1y79 (Zn: 1) - Crystal Structure of the E.Coli Dipeptidyl Carboxypeptidase Dcp in Complex with A Peptidic Inhibitor
  15. 1y7p (Zn: 3) - 1.9 A Crystal Structure of A Protein of Unknown Function AF1403 From Archaeoglobus Fulgidus, Probable Metabolic Regulator
  16. 1y7w (Zn: 3) - Crystal Structure of A Halotolerant Carbonic Anhydrase From Dunaliella Salina
    Other atoms: Na (2);
  17. 1y8f (Zn: 40) - Solution Structure of the MUNC13-1 C1-Domain
  18. 1y8j (Zn: 1) - Crystal Structure of Human Nep Complexed with An Imidazo[4, 5-C]Pyridine Inhibitor
  19. 1y8q (Zn: 2) - Sumo E1 Activating Enzyme SAE1-SAE2-Mg-Atp Complex
    Other atoms: Mg (2);
  20. 1y8r (Zn: 2) - Sumo E1 Activating Enzyme SAE1-SAE2-SUMO1-Mg-Atp Complex
    Other atoms: Mg (2);
  21. 1y93 (Zn: 2) - Crystal Structure of the Catalytic Domain of Human MMP12 Complexed with Acetohydroxamic Acid at Atomic Resolution
    Other atoms: Ca (3);
  22. 1y9a (Zn: 4) - Alcohol Dehydrogenase From Entamoeba Histolotica in Complex with Cacodylate
    Other atoms: Mg (2); As (2);
  23. 1y9q (Zn: 1) - Crystal Structure of HTH_3 Family Transcriptional Regulator From Vibrio Cholerae
  24. 1yai (Zn: 3) - X-Ray Structure of A Bacterial Copper,Zinc Superoxide Dismutase
    Other atoms: Cu (3);
  25. 1yaz (Zn: 1) - Azide-Bound Yeast Cu(II)/Zn Superoxide Dismutase Room Temperature (298K) Structure
    Other atoms: Cu (1);
  26. 1yb0 (Zn: 3) - Structure of Plyl
  27. 1ybq (Zn: 4) - Crystal Structure of Escherichia Coli Isoaspartyl Dipeptidase Mutant D285N Complexed with Beta- Aspartylhistidine
  28. 1yc2 (Zn: 9) - SIR2AF2-Nad-Adpribose-Nicotinamide
  29. 1yc5 (Zn: 1) - SIR2-P53 Peptide-Nicotinamide
  30. 1ycf (Zn: 3) - Oxidized (Di-Ferric) Fpra From Moorella Thermoacetica
    Other atoms: Fe (8);
  31. 1ycg (Zn: 14) - X-Ray Structures of Moorella Thermoacetica Fpra. Novel Diiron Site Structure and Mechanistic Insights Into A Scavenging Nitric Oxide Reductase
    Other atoms: Fe (8);
  32. 1ych (Zn: 8) - X-Ray Crystal Structures of Moorella Thermoacetica Fpra. Novel Diiron Site Structure and Mechanistic Insights Into A Scavenging Nitric Oxide Reductase
    Other atoms: Fe (8);
  33. 1ycm (Zn: 40) - Solution Structure of Matrix Metalloproteinase 12 (MMP12) in the Presence of N-Isobutyl-N-[4- Methoxyphenylsulfonyl]Glycyl Hydroxamic Acid (Nngh)
    Other atoms: Ca (60);
  34. 1ycs (Zn: 1) - P53-53BP2 Complex
  35. 1yda (Zn: 1) - Structural Basis of Inhibitor Affinity to Variants of Human Carbonic Anhydrase II
    Other atoms: Hg (1);
  36. 1ydb (Zn: 1) - Structural Basis of Inhibitor Affinity to Variants of Human Carbonic Anhydrase II
    Other atoms: Hg (1);
  37. 1ydc (Zn: 1) - Structural Basis of Inhibitor Affinity to Variants of Human Carbonic Anhydrase II
    Other atoms: Hg (1);
  38. 1ydd (Zn: 1) - Structural Basis of Inhibitor Affinity to Variants of Human Carbonic Anhydrase II
    Other atoms: Hg (1);
  39. 1ye3 (Zn: 2) - Horse Liver Alcohol Dehydrogenase Apoenzyme
  40. 1yec (Zn: 7) - Structure of A Catalytic Antibody IGG2A Fab Fragment (D2.3)
Page generated: Mon Dec 15 11:26:18 2025

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