Zinc in PDB 1y9q: Crystal Structure of HTH_3 Family Transcriptional Regulator From Vibrio Cholerae

The structure of Crystal Structure of HTH_3 Family Transcriptional Regulator From Vibrio Cholerae, PDB code: 1y9q was solved by D.Kumaran, S.Swaminathan, S.K.Burley, New York Sgx Researchcenter For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.01 / 1.90
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	79.226, 79.226, 49.849, 90.00, 90.00, 120.00
R / Rfree (%)	19.9 / 22.4

The binding sites of Zinc atom in the Crystal Structure of HTH_3 Family Transcriptional Regulator From Vibrio Cholerae (pdb code 1y9q). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of HTH_3 Family Transcriptional Regulator From Vibrio Cholerae, PDB code: 1y9q:

Zinc binding site 1 out of 1 in the Crystal Structure of HTH_3 Family Transcriptional Regulator From Vibrio Cholerae


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of HTH_3 Family Transcriptional Regulator From Vibrio Cholerae within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn202 b:16.8 occ:1.00 OE2 A:GLU128 2.1 10.7 1.0 O A:MED201 2.1 18.4 1.0 NE2 A:HIS122 2.1 13.6 1.0 OH A:TYR164 2.2 12.5 1.0 N A:MED201 2.2 19.0 1.0 NE2 A:HIS162 2.2 15.9 1.0 C A:MED201 2.9 18.9 1.0 CD A:GLU128 3.0 10.9 1.0 CD2 A:HIS122 3.1 14.0 1.0 CA A:MED201 3.1 19.2 1.0 CE1 A:HIS122 3.1 16.4 1.0 CD2 A:HIS162 3.1 14.9 1.0 OE1 A:GLU128 3.3 11.7 1.0 CE1 A:HIS162 3.3 15.7 1.0 CZ A:TYR164 3.4 15.2 1.0 CE1 A:TYR164 3.9 16.2 1.0 OXT A:MED201 4.0 18.1 1.0 CB A:MED201 4.1 20.8 1.0 ND1 A:HIS122 4.2 15.5 1.0 CG A:HIS122 4.2 15.3 1.0 OG A:SER119 4.2 19.3 1.0 CG A:HIS162 4.3 15.2 1.0 CG A:GLU128 4.3 8.8 1.0 ND1 A:HIS162 4.3 14.1 1.0 CB A:SER119 4.5 20.5 1.0 CE2 A:TYR164 4.6 14.4 1.0 CB A:SER158 4.8 16.6 1.0 O A:HOH322 5.0 32.3 1.0

D.Kumaran, S.Swaminathan, New York Structural Genomics Research Consortium(Nysgrc). Crystal Structure of HTH_3 Family Transcriptional Regulator From Vibrio Cholerae To Be Published.