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Zinc in PDB, part 533 (files: 21281-21320), PDB 8s37-8sex

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 21281-21320 (PDB 8s37-8sex).
  1. 8s37 (Zn: 1) - Dna-Bound Type IV-A3 Crispr Effector in Complex with Ding Helicase From K. Pneumoniae (State III)
  2. 8s3m (Zn: 1) - LYSTT72, A Lytic Endopeptidase From Thermus Thermophilus MAT72 Phage VB_TT72
  3. 8s3u (Zn: 1) - LYSTT72, A Lytic Endopeptidase From Thermus Thermophilus MAT72 Phage VB_TT72
  4. 8s3w (Zn: 1) - LYSTT72, A Lytic Endopeptidase From Thermus Thermophilus MAT72 Phage VB_TT72
  5. 8s4f (Zn: 2) - Human Carbonic Anhydrase I Covalently Bound to AV21-08
    Other atoms: F (6);
  6. 8s52 (Zn: 10) - Rna Polymerase II Core Initially Transcribing Complex with An Ordered Rna of 10 Nt
    Other atoms: Mg (1);
  7. 8s55 (Zn: 9) - Rna Polymerase II Early Elongation Complex Bound to Tfiie and Tfiif - State A (Composite Structure)
    Other atoms: Mg (1);
  8. 8s5n (Zn: 10) - Rna Polymerase II Core Initially Transcribing Complex with An Ordered Rna of 12 Nt
    Other atoms: Mg (1);
  9. 8s6z (Zn: 26) - CD28 in Complex with the Antibody Fab Fragment AI3
  10. 8s7v (Zn: 1) - Methyl-Coenzyme M Reductase Activation Complex Binding to the A2 Component
    Other atoms: Ni (2); Fe (24); Mg (2);
  11. 8s8d (Zn: 3) - Structure of A Yeast 48S-Auc Preinitiation Complex in Closed Conformation (Model PY48S-Auc-2)
    Other atoms: Mg (116);
  12. 8s8e (Zn: 3) - Structure of A Yeast 48S-Auc Preinitiation Complex in Closed Conformation (Model PY48S-Auc-3.1)
    Other atoms: Mg (116);
  13. 8s8f (Zn: 4) - Structure of A Yeast 48S-Auc Preinitiation Complex in Closed Conformation (Model PY48S-Auc-3.2)
    Other atoms: Mg (116);
  14. 8s8g (Zn: 3) - Structure of A Yeast 48S-Auc Preinitiation Complex in Closed Conformation (Model PY48S-Auc-2.1)
    Other atoms: Mg (116);
  15. 8s8h (Zn: 3) - Structure of A Yeast 48S-Auc Preinitiation Complex in Closed Conformation (Model PY48S-Auc-2.2)
    Other atoms: Mg (116);
  16. 8s8i (Zn: 4) - Structure of A Yeast 48S-Auc Preinitiation Complex in Closed Conformation (Model PY48S-Auc-EIF1)
    Other atoms: Mg (117);
  17. 8s8j (Zn: 4) - Structure of A Yeast 48S-Auc Preinitiation Complex in Closed Conformation (Model PY48S-Auc-EIF5)
    Other atoms: Mg (115);
  18. 8s8k (Zn: 4) - Structure of A Yeast 48S-Auc Preinitiation Complex in Swivelled Conformation (Model PY48S-Auc-Swiv-EIF1)
    Other atoms: Mg (96);
  19. 8s8w (Zn: 2) - Sars-Cov-2 NSP10-16 Methyltransferase in Complex with Sangivamycin and M7GPPPA-Rna (CAP0-Rna)
  20. 8s8x (Zn: 2) - Sars-Cov-2 NSP10-16 Methyltransferase in Complex with Toyocamycin and M7GPPPA-Rna (CAP0-Rna)
    Other atoms: Mg (1);
  21. 8s93 (Zn: 1) - Crystal Structure of the pH-Th/Kinase Complex of Bruton'S Tyrosine Kinase
  22. 8s9r (Zn: 2) - SAL2, Staphylococcus Aureus Lipase 2 (Geh, LIP2), Apo Form
    Other atoms: Ca (2);
  23. 8saf (Zn: 1) - Ca II in Complex with the Coumarin Benzene Sulfonamide SG1-51
  24. 8sag (Zn: 1) - Carbonic Anhydrase II in Complex with the Coumarin Benzene Sulfonamide SG1-57
  25. 8sbm (Zn: 4) - Crystal Structure of the Wild-Type Catalytic Atp-Binding Domain of Mtb Doss
    Other atoms: Na (1);
  26. 8scz (Zn: 1) - Cryo-Em Structure of 14AA-Gs Rig-I in Complex with P3SLR30
  27. 8sd0 (Zn: 1) - Cryo-Em Structure of Rig-I in Complex with P3SLR14
  28. 8sd1 (Zn: 1) - Carbonic Anhydrase II Radiation Damage Rt 1-30
  29. 8sd6 (Zn: 1) - Carbonic Anhydrase II Radiation Damage Rt 31-60
  30. 8sd7 (Zn: 1) - Carbonic Anhydrase II Radiation Damage Rt 61-90
  31. 8sd8 (Zn: 1) - Carbonic Anhydrase II Radiation Damage Rt 91-120
  32. 8sd9 (Zn: 1) - Carbonic Anhydrase II Radiation Damage Rt 121-150
  33. 8se1 (Zn: 10) - Structure of Full-Length Human Protein Kinase C Beta 2 (Pkcbii) in the Inactive Conformation
    Other atoms: Mg (6);
  34. 8se2 (Zn: 8) - Structure of Full-Length Human Protein Kinase C Beta 1 (Pkcbi) in the Active and Inactive Conformation Soaked in Manganese Chloride
    Other atoms: Ca (1); Mn (2);
  35. 8se3 (Zn: 4) - Structure of Full-Length Human Protein Kinase C Beta 1 (Pkcbi) in the Active Conformation
  36. 8se4 (Zn: 8) - Structure of Full-Length Human Protein Kinase C Beta 1 (Pkcbi) in the Active and Inactive Conformation
  37. 8seu (Zn: 4) - Cryo-Em Structure of RYR1 (Local Refinement of Tmd)
  38. 8sev (Zn: 4) - Cryo-Em Structure of RYR1 + Atp-Gamma-S (Local Refinement of Tmd)
  39. 8sew (Zn: 4) - Cryo-Em Structure of RYR1 + Adp (Local Refinement of Tmd)
  40. 8sex (Zn: 4) - Cryo-Em Structure of RYR1 + Amp (Local Refinement of Tmd)
Page generated: Mon Dec 15 11:44:43 2025

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