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Zinc in PDB, part 531 (files: 21201-21240), PDB 8rm6-8s55

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 21201-21240 (PDB 8rm6-8s55).
  1. 8rm6 (Zn: 4) - Crystal Structure of Human Androgen Receptor Dna Binding Domain Bound to Its Response Element: C3(1)Are
  2. 8rm7 (Zn: 4) - Crystal Structure of Human Androgen Receptor Dna Binding Domain Bound to Its Response Element: Mmtv-177 Gre/Are
  3. 8rnt (Zn: 1) - Structure of Ribonuclease T1 Complexed with Zinc(II) at 1.8 Angstroms Resolution: A ZN2+.6H2O.Carboxylate Clathrate
  4. 8rpr (Zn: 1) - Crystal Structure of Sgvm Methyltransferase in Complex with Alpha- Ketoleucine and ZN2+ Ion
    Other atoms: Mg (5); Cl (1);
  5. 8rq1 (Zn: 1) - Crystal Structure of Crbn-Midi
  6. 8rq8 (Zn: 1) - Crystal Structure of Crbn-Midi in Complex with Mezigdomide
    Other atoms: F (1);
  7. 8rqa (Zn: 1) - Crystal Structure of Crbn-Midi in Complex with Lenalidomide
  8. 8rqb (Zn: 24) - Cryo-Em Structure of Mouse Heavy-Chain Apoferritin
    Other atoms: Fe (6);
  9. 8rqc (Zn: 4) - Crystal Structure of Crbn-Midi in Complex with Mezigdomide and IKZF1 ZF2
    Other atoms: F (2);
  10. 8rr1 (Zn: 2) - Human Mitochondrial Rnase Z Complex with ELAC2-D550N Catalytic Mutant and Trna-Tyr Precursor (Composite Model)
  11. 8rr3 (Zn: 2) - Human Mitochondrial Rnase Z Complex with ELAC2-D550N Catalytic Mutant and Trna-Gln Precursor (Composite Model)
  12. 8rr4 (Zn: 2) - Human Mitochondrial Rnase Z Complex with ELAC2-D550N Catalytic Mutant with Ordered Flexible Arm and Trna-Tyr Precursor - (Composite Model)
  13. 8rsi (Zn: 2) - Crystal Structure of Methanobrevibacter Oralis Macrodomain
  14. 8rsj (Zn: 2) - Crystal Structure of Methanobrevibacter Oralis Macrodomain in Complex with Adpr in Open Conformation
  15. 8rsl (Zn: 2) - Crystal Structure of Staphylococcus Aureus Macrodomain
  16. 8rsm (Zn: 1) - Crystal Structure of Streptococcus Pyogenes Macrodomain in Complex with Adp-Ribose
  17. 8rsn (Zn: 2) - Macrodomain-Fused Sirtm (MFS1) From Fusarium Oxysporum F. Sp. Cubense Race 1
    Other atoms: K (2);
  18. 8rue (Zn: 4) - Crystal Structure of Rhizobium Etli L-Asparaginase Reav H139A Mutant
    Other atoms: Cl (1);
  19. 8ruf (Zn: 4) - Crystal Structure of Rhizobium Etli L-Asparaginase Reav D187A Mutant
    Other atoms: Cl (4);
  20. 8rup (Zn: 1) - Chromosome Passenger Complex (Cpc) Localization Module in Complex with H3.T3P-Nucleosome
  21. 8rv5 (Zn: 2) - Sars-Cov-2 NSP16-NSP10 in Complex with Sam Derivative Inhibitor 1
  22. 8rw1 (Zn: 3) - Structure of A Yeast 48S-Auc Preinitiation Complex in Closed Conformation
    Other atoms: Mg (115);
  23. 8rww (Zn: 1) - Crystal Structure of Native Alpha-Keto C-Methyl Transferase Sgvm Bound to Ketoleucine
    Other atoms: Cl (1);
  24. 8rwz (Zn: 3) - Open Non-Crosslinked Structure BRD4BD2-MZ1-(NEDD8)-CRL2VHL
    Other atoms: Cl (1);
  25. 8rx0 (Zn: 3) - (NEDD8)-CRL2VHL-MZ1-BRD4BD2-Ub(G76S, K48C)-UBE2R1(C93K, S138C, C191S, C223S)-Ub
    Other atoms: Cl (1);
  26. 8rxb (Zn: 13) - Human UPF1 Ch Domain in Complex with SMG6 Peptide
  27. 8rxf (Zn: 1) - Crystal Structure of S-Sad Phased Alpha-Keto C-Methyl Transferase Sgvm Bound to Ketoleucine
    Other atoms: Cl (1);
  28. 8rxg (Zn: 1) - Crystal Structure of Alpha-Keto C-Methyl Transferase Sgvm Bound to Sam
    Other atoms: Cl (1);
  29. 8s09 (Zn: 10) - H. Sapiens MCM2-7 Double Hexamer Bound to Double Stranded Dna
    Other atoms: Mg (8);
  30. 8s0e (Zn: 1) - H. Sapiens Occm Bound to Double Stranded Dna
    Other atoms: Mg (5);
  31. 8s0f (Zn: 1) - H. Sapiens OC1M Bound to Double Stranded Dna
    Other atoms: Mg (5);
  32. 8s1p (Zn: 4) - Ylmh Bound to Ptrna-50S
    Other atoms: Cl (2); K (47); Mg (158);
  33. 8s1x (Zn: 1) - Crystal Structure of Actinonin-Bound PDF1 and the Computationally Designed DBACT553_1 Protein Binder
    Other atoms: K (1);
  34. 8s24 (Zn: 1) - Structure of the E3 Ubiquitin Ligase RNF213, Determined By Cryoem
    Other atoms: Mg (1);
  35. 8s35 (Zn: 1) - Dna-Bound Type IV-A3 Crispr Effector in Complex with Ding Helicase From K. Pneumoniae (State I)
  36. 8s36 (Zn: 1) - Dna-Bound Type IV-A3 Crispr Effector in Complex with Ding Helicase From K. Pneumoniae (State II)
  37. 8s37 (Zn: 1) - Dna-Bound Type IV-A3 Crispr Effector in Complex with Ding Helicase From K. Pneumoniae (State III)
  38. 8s4f (Zn: 2) - Human Carbonic Anhydrase I Covalently Bound to AV21-08
    Other atoms: F (6);
  39. 8s52 (Zn: 10) - Rna Polymerase II Core Initially Transcribing Complex with An Ordered Rna of 10 Nt
    Other atoms: Mg (1);
  40. 8s55 (Zn: 9) - Rna Polymerase II Early Elongation Complex Bound to Tfiie and Tfiif - State A (Composite Structure)
    Other atoms: Mg (1);
Page generated: Tue Feb 25 12:11:19 2025

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