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Zinc in PDB, part 338 (files: 13481-13520), PDB 5wzz-5xio

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 13481-13520 (PDB 5wzz-5xio).
  1. 5wzz (Zn: 8) - The Siah E3 Ubiquitin Ligases Promote Wnt/ Beta-Catenin Signaling Through Mediating Wnt-Induced Axin Degradation
  2. 5x16 (Zn: 1) - SIRT6 Apo Structure
  3. 5x19 (Zn: 2) - Co Bound Cytochrome C Oxidase at 100 Micro Sec After Pump Laser Irradiation to Release Co From O2 Reduction Center
    Other atoms: Mg (2); Fe (4); Cu (6); Na (2);
  4. 5x1b (Zn: 2) - Co Bound Cytochrome C Oxidase at 20 Nsec After Pump Laser Irradiation to Release Co From O2 Reduction Center
    Other atoms: Mg (2); Fe (4); Cu (6); Na (2);
  5. 5x1f (Zn: 2) - Co Bound Cytochrome C Oxidase Without Pump Laser Irradiation at 278K
    Other atoms: Mg (2); Fe (4); Cu (6); Na (2);
  6. 5x1h (Zn: 12) - Structure of Legionella Pneumophila Dotn
  7. 5x21 (Zn: 2) - Crystal Structure of Thermus Thermophilus Transcription Initiation Complex with Gpa and Pseudouridimycin (Pum)
    Other atoms: Mg (6);
  8. 5x22 (Zn: 4) - Crystal Structure of Thermus Thermophilus Transcription Initiation Complex with Gpa and Cmpcpp
    Other atoms: Mg (14);
  9. 5x42 (Zn: 2) - Structure of Dotl(590-659)-Dotn Derived From Legionella Pneumophila
  10. 5x45 (Zn: 4) - Crystal Structure of 2A Protease From Human Rhinovirus C15
  11. 5x4j (Zn: 4) - The Crystal Structure of Pyrococcus Furiosus Recj (Zn-Soaking)
    Other atoms: Cl (1);
  12. 5x4k (Zn: 3) - The Complex Crystal Structure of Pyrococcus Furiosus Recj and Cmp
  13. 5x4z (Zn: 16) - Rna Polymerase II From Komagataella Pastoris (Type-1 Crystal)
  14. 5x50 (Zn: 8) - Rna Polymerase II From Komagataella Pastoris (Type-2 Crystal)
  15. 5x51 (Zn: 16) - Rna Polymerase II From Komagataella Pastoris (Type-3 Crystal)
  16. 5x6g (Zn: 2) - Crystal Structure of SMAD5-MH1/Palindromic Sbe Dna Complex
  17. 5x6h (Zn: 1) - Crystal Structure of SMAD5-MH1/Gc-Bre Dna Complex
  18. 5x6i (Zn: 1) - Crystal Structure of B. Subtilis Adenylate Kinase Variant
    Other atoms: Mg (1); Ca (2);
  19. 5x6j (Zn: 1) - Crystal Structure of B. Globisporus Adenylate Kinase Variant
  20. 5x6m (Zn: 4) - Crystal Structure of SMAD5-MH1 in Complex with A Composite Dna Sequence
  21. 5x6t (Zn: 40) - N-Terminal Zinc Finger of Synaptotagmin-Like Protein 4
  22. 5x87 (Zn: 15) - Crystal Structure of A Bacterial Bestrophin Homolog From Klebsiella Pneumoniae with A Mutation L177T
  23. 5xbn (Zn: 1) - Crystal Structure of WSS1 From Saccharomyces Cerevisiae
  24. 5xbv (Zn: 1) - Crystal Structure of WSS1 Mutant From Saccharomyces Cerevisiae
  25. 5xch (Zn: 4) - Crystal Structure of Wild Type VPS29 Complexed with Zn+2 From Entamoeba Histolytica
  26. 5xdq (Zn: 2) - Bovine Heart Cytochrome C Oxidase in the Fully Oxidized State with pH 7.3 at 1.77 Angstrom Resolution
    Other atoms: Mg (2); Fe (4); Cu (6); Na (4);
  27. 5xdx (Zn: 2) - Bovine Heart Cytochrome C Oxidase in the Reduced State with pH 7.3 at 1.99 Angstrom Resolution
    Other atoms: Mg (2); Fe (4); Cu (6); Na (4);
  28. 5xek (Zn: 40) - C-Terminal Zinc Finger of Ring Finger Protein 141
  29. 5xev (Zn: 2) - Crystal Structure of A Novel Xaa-Pro Dipeptidase From Deinococcus Radiodurans
    Other atoms: Cl (1);
  30. 5xfn (Zn: 4) - Structure of the N-Terminal Domains of PHF1
  31. 5xfo (Zn: 4) - Structure of the N-Terminal Domains of PHF1
  32. 5xfp (Zn: 12) - Binary Complex of PHF1 and A Double Stranded Dna
  33. 5xfq (Zn: 8) - Ternary Complex of PHF1, A Dna Duplex and A Histone Peptide
  34. 5xfr (Zn: 8) - Ternary Complex of MTF2, Dna and Histone
  35. 5xgw (Zn: 4) - Isoaspartyl Dipeptidase From Colwellia Psychrerythraea Strain 34H
  36. 5xgx (Zn: 4) - Crystal Structure of Colwellia Psychrerythraea Strain 34H Isoaspartyl Dipeptidase E80Q Mutant Complexed with Beta-Isoaspartyl Lysine
  37. 5xhs (Zn: 1) - Crystal Structure of SIRT5 Complexed with A Fluorogenic Small-Molecule Substrate Subka
  38. 5xht (Zn: 40) - The Phd Finger of Human KIAA1045 Protein
  39. 5xil (Zn: 1) - Crystal Structure of Leishmania Major Prolyl-Trna Synthetase (Lmprs)
    Other atoms: Mg (3);
  40. 5xio (Zn: 2) - Crystal Structure of Cryptosporidium Parvum Prolyl-Trna Synthetase (Cpprs) in Complex with Halofuginone
    Other atoms: Br (2); Cl (2);
Page generated: Mon Dec 15 11:37:07 2025

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