Zinc in PDB, part 263 (files: 10481-10520),
PDB 5axq-5b79
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 10481-10520 (PDB 5axq-5b79).
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5axq (Zn: 2) - Crystal Structure of the Catalytic Domain of PDE10A Complexed with Highly Potent and Brain-Penetrant PDE10A Inhibitor with 2-Oxindole Scaffold
Other atoms:
F (2);
Mg (2);
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5axr (Zn: 2) - Crystal Structure of Metallo-Beta-Lactamase Smb-1 Bound to 2- Mercaptoethanesulfonate
Other atoms:
Na (6);
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5aya (Zn: 2) - Crystal Structure of Metallo-Beta-Lactamase Smb-1 Bound to L-Captopril
Other atoms:
Na (2);
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5ayo (Zn: 2) - Crystal Structure of A Bacterial Homologue of Iron Transporter Ferroportin in Inward-Facing State
Other atoms:
K (1);
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5b0h (Zn: 2) - Crystal Structure of Human Leukocyte Cell-Derived Chemotaxin 2
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5b15 (Zn: 2) - Crystal Structure of Metallo-Beta-Lactamase Smb-1 Bound to Hydrolyzed Doripenem
Other atoms:
Na (7);
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5b16 (Zn: 2) - X-Ray Structure of Drosha in Complex with the C-Terminal Tail of DGCR8.
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5b1a (Zn: 2) - Bovine Heart Cytochrome C Oxidase in the Fully Oxidized State at 1.5 Angstrom Resolution
Other atoms:
Mg (2);
Fe (4);
Cu (6);
Na (2);
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5b1b (Zn: 2) - Bovine Heart Cytochrome C Oxidase in the Fully Reduced State at 1.6 Angstrom Resolution
Other atoms:
Mg (2);
Fe (4);
Cu (6);
Na (2);
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5b1u (Zn: 2) - Crystal Structure of Metallo-Beta-Lactamase Smb-1 Bound to Hydrolyzed Imipenem
Other atoms:
Na (15);
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5b25 (Zn: 4) - Crystal Structure of Human PDE1B with Inhibitor 3
Other atoms:
F (4);
Mg (4);
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5b2e (Zn: 3) - N,N'-Diacetylchitobiose Deacetylase From Pyrococcus Horikoshii Complexed with Its Inhibitor Mpg (Acetate-Containing Condition)
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5b2f (Zn: 3) - N,N'-Diacetylchitobiose Deacetylase From Pyrococcus Horikoshii Complexed with Its Inhibitor Mpg (Phosphate-Containing Condition)
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5b2o (Zn: 1) - Crystal Structure of Francisella Novicida CAS9 in Complex with Sgrna and Target Dna (Tgg Pam)
Other atoms:
Ca (17);
Cl (2);
Na (4);
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5b2p (Zn: 1) - Crystal Structure of Francisella Novicida CAS9 in Complex with Sgrna and Target Dna (Tga Pam)
Other atoms:
Ca (17);
Cl (2);
Na (4);
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5b2q (Zn: 1) - Crystal Structure of Francisella Novicida CAS9 Rha in Complex with Sgrna and Target Dna (Tgg Pam)
Other atoms:
Ca (17);
Cl (2);
Na (4);
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5b3h (Zn: 4) - The Crystal Structure of the Jackdaw/IDD10 Bound to the Heterodimeric Shr-Scr Complex
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5b3r (Zn: 4) - Crystal Structure of Metallo-Beta-Lactamase Imp-18 From Pseudomonas Aeruginosa
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5b3s (Zn: 2) - Bovine Heart Cytochrome C Oxidase in the Carbon Monoxide-Bound Mixed- Valence State at 1.68 Angstrom Resolution (50 K)
Other atoms:
Mg (2);
Fe (4);
Cu (6);
Na (2);
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5b4e (Zn: 2) - Sulfur Transferase Ttua in Complex with Iron Sulfur Cluster and Atp Derivative
Other atoms:
Fe (4);
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5b4f (Zn: 2) - Sulfur Transferase Ttua in Complex with Iron Sulfur Cluster
Other atoms:
Fe (4);
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5b4k (Zn: 2) - Crystal Structure of the Catalytic Domain of Human PDE10A Complexed with N-(4-((5-Methyl-5H-Pyrrolo[3,2-D]Pyrimidin-4-Yl)Oxy)Phenyl)-1H- Benzimidazol-2-Amine
Other atoms:
Mg (2);
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5b4l (Zn: 2) - Crystal Structure of the Catalytic Domain of Human PDE10A Complexed with 1-(Cyclopropylmethyl)-5-(2-(2,3-Dihydro-1H-Imidazo[1,2- A]Benzimidazol-1-Yl)Ethoxy)-3-(1-Phenyl-1H-Pyrazol-5-Yl)Pyridazin- 4(1H)-One
Other atoms:
Mg (2);
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5b5l (Zn: 1) - Crystal Structure of Acetyl Esterase Mutant S10A with Acetate Ion
Other atoms:
Ca (1);
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5b5o (Zn: 4) - Crystal Structure of the Catalytic Domain of Mmp-13 Complexed with N- Phenyl-4-((4H-1,2,4-Triazol-3-Ylsulfanyl)Methyl)-1,3-Thiazol-2-Amine
Other atoms:
Ca (4);
Na (2);
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5b5p (Zn: 4) - Crystal Structure of the Catalytic Domain of Mmp-13 Complexed with 4- Oxo-N-(3-(2-(1H-1,2,4-Triazol-3-Ylsulfanyl)Ethoxy)Benzyl)-3,4- Dihydroquinazoline-2-Carboxamide
Other atoms:
Ca (6);
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5b5v (Zn: 4) - Structure of Full-Length MOB1B
Other atoms:
Cl (2);
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5b5w (Zn: 1) - Crystal Structure of MOB1-LATS1 Ntr Domain Complex
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5b5x (Zn: 1) - Crystal Structure of Limiting CO2-Inducible Protein Lcic
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5b5y (Zn: 2) - Crystal Structure of PTLCIB4, A Homolog of the Limiting CO2-Inducible Protein Lcib
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5b5z (Zn: 2) - Crystal Structure of PTLCIB4 H88A Mutant, A Homolog of the Limiting CO2-Inducible Protein Lcib
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5b60 (Zn: 1) - Crystal Structure of PTLCIB4 S47R Mutant, A Homolog of the Limiting CO2-Inducible Protein Lcib
Other atoms:
Cl (1);
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5b6b (Zn: 8) - Complex of LATS1 and Phosphomimetic MOB1B
Other atoms:
Cl (7);
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5b6l (Zn: 1) - Structure of Deg Protease Hhoa From Synechocystis Sp. Pcc 6803
Other atoms:
Na (1);
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5b73 (Zn: 3) - Crystal Structure of Human ZMYND8 Phd-Bromo-Pwwp Domain
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5b75 (Zn: 4) - Crystal Structure of Moz Double Phd Finger in Complex with Histone H3 Butyrylation at K14
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5b76 (Zn: 4) - Crystal Structure of Moz Double Phd Finger Domain in Complex with Histone H3 Crotonylation at K14
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5b77 (Zn: 4) - Crystal Structrue of Moz Double Phd Finger in Complex with Histone H3 Propionylation at K14
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5b78 (Zn: 4) - Crystal Structure of Moz Double Phd Finger Mutant-S210D/N235R in Complex with Histone H3 Crotonylation at K14
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5b79 (Zn: 4) - Crystal Structure of DPF2 Double Phd Finger
Page generated: Mon Dec 15 11:34:13 2025
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