Zinc in PDB, part 254 (files: 10121-10160),
PDB 4xz5-4yfx
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 10121-10160 (PDB 4xz5-4yfx).
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4xz5 (Zn: 4) - Structure of the Thermostable Alpha-Carbonic Anydrase From Thiomicrospira Crunogena Xcl-2 Gammaproteobacterium
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4y06 (Zn: 5) - Crystal Structure of the Dap Bii (G675R) Dipeptide Complex
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4y0j (Zn: 1) - H/D Exchanged Human Carbonic Anhydrase II pH 6 Room Temperature Neutron Crystal Structure.
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4y0x (Zn: 1) - Crystal Structure of the S/T Protein Kinase Pkng From Mycobacterium Tuberculosis in Complex with Adp
Other atoms:
Mg (2);
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4y12 (Zn: 1) - Crystal Structure of the S/T Protein Kinase Pkng From Mycobacterium Tuberculosis in Complex with Ags
Other atoms:
Mg (2);
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4y2b (Zn: 1) - Co-Crystal Structure of 3-Ethyl-2-(Isopropylamino)-7-(Pyridin-3-Yl) Thieno[3,2-D]Pyrimidin-4(3H)-One Bound to PDE7A
Other atoms:
Mg (1);
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4y52 (Zn: 8) - Crystal Structure of 5-Carboxycytosine Recognition By Rna Polymerase II During Transcription Elongation.
Other atoms:
Mg (1);
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4y6l (Zn: 2) - Human SIRT2 in Complex with Myristoylated Peptide (H3K9MYR)
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4y6o (Zn: 2) - Human SIRT2 in Complex with Myristoylated Peptide (Tnf-ALPHAK20MYR)
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4y6q (Zn: 4) - Human SIRT2 in Complex with 2-O-Myristoyl-Adp-Ribose
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4y7l (Zn: 4) - T6SS Protein Tssm C-Terminal Domain (869-1107) From Eaec
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4y7n (Zn: 8) - The Structure Insight Into 5-Carboxycytosine Recognition By Rna Polymerase II During Transcription Elongation.
Other atoms:
Mg (2);
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4y7o (Zn: 4) - T6SS Protein Tssm C-Terminal Domain (869-1107) From Eaec
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4y86 (Zn: 2) - Crystal Structure of PDE9 in Complex with Racemic Inhibitor C33
Other atoms:
Mg (2);
Cl (2);
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4y87 (Zn: 2) - Crystal Structure of Phosphodiesterase 9 in Complex with (R)-C33 (6- {[(1R)-1-(4-Chlorophenyl)Ethyl]Amino}-1-Cyclopentyl-1,5-Dihydro-4H- Pyrazolo[3,4-D]Pyrimidin-4-One)
Other atoms:
Mg (2);
Cl (2);
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4y8a (Zn: 7) - Crystal Structure of the N-Terminal Domain of CEACAM6
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4y8c (Zn: 2) - Crystal Structure of Phosphodiesterase 9 in Complex with (S)-C33
Other atoms:
Mg (2);
Cl (2);
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4y93 (Zn: 1) - Crystal Structure of the pH-Th-Kinase Construct of Bruton'S Tyrosine Kinase (Btk)
Other atoms:
Ca (1);
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4y94 (Zn: 4) - Crystal Structure of the pH-Th Module of Bruton'S Tyrosine Kinase Bound to Inositol Hexakisphosphate
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4y97 (Zn: 8) - Crystal Structure of Human Pol Alpha B-Subunit in Complex with C- Terminal Domain of Catalytic Subunit
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4yab (Zn: 4) - Crystal Structure of TRIM24 Phd-Bromodomain Complexed with 1-Methyl-5- (2-Methyl-1 3-Thiazol-4-Yl)-2 3-Dihydro-1H-Indol-2-One (1)
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4yad (Zn: 4) - Crystal Structure of TRIM24 Phd-Bromodomain Complexed with 2,4- Dimethoxy-N-(1-Methyl-2-Oxo-1,2,3,4-Tetrahydroquinolin-6-Yl)Benzene- 1-Sulfonamide (3B)
Other atoms:
Cl (2);
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4yat (Zn: 4) - Crystal Structure of TRIM24 Phd-Bromodomain Complexed with N-(1,3- Dimethyl-2-Oxo-2,3-Dihydro-1H-1,3-Benzodiazol-5-Yl)-4-Methoxybenzene- 1-Sulfonamide (5B)
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4yax (Zn: 4) - Crystal Structure of TRIM24 Phd-Bromodomain Complexed with N-[6-(4- Methoxyphenoxy)-1,3-Dimethyl-2-Oxo-2,3-Dihydro-1H-1,3-Benzodiazol-5- Yl]Benzenesulfonamide (5G)
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4ybg (Zn: 1) - Crystal Structure of the Mael Domain of Drosophila Melanogaster Maelstrom
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4ybh (Zn: 7) - Crystal Structure of the Human Rage Ectodomain (VC1C2 Fragment) in Complex with Human S100A6
Other atoms:
Cl (5);
Ca (2);
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4ybm (Zn: 4) - Crystal Structure of TRIM24 Phd-Bromodomain Complexed with N-{6-[3- (Benzyloxy)Phenoxy]-1,3-Dimethyl-2-Oxo-2,3-Dihydro-1H-1,3- Benzodiazol-5-Yl}-3,4-Dimethoxybenzene-1-Sulfonamide (7B)
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4ybs (Zn: 2) - Crystal Structure of TRIM24 Phd-Bromodomain Complexed with N-{1,3- Dimethyl-6-[3-(2-Methylpropoxy)Phenoxy]-2-Oxo-2,3-Dihydro-1H-1,3- Benzodiazol-5-Yl}-1,2-Dimethyl-1H-Imidazole-4-Sulfonamide (7G)
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4ybt (Zn: 2) - Crystal Structure of TRIM24 Phd-Bromodomain Complexed with N-{1,3- Dimethyl-2-Oxo-6-[3-(Oxolan-3-Ylmethoxy)Phenoxy]-2,3-Dihydro-1H-1,3- Benzodiazol-5-Yl}-1-Methyl-1H-Imidazole-4-Sulfonamide (7L)
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4yc9 (Zn: 2) - Crystal Structure of TRIM24 Phd-Bromodomain Complexed with N-(6-{3-[4- (Dimethylamino)Butoxy]-5-Propoxyphenoxy}-1,3-Dimethyl-2-Oxo-2,3- Dihydro-1H-1,3-Benzodiazol-5-Yl)-3,4-Dimethoxybenzene-1-Sulfonamide (8I)
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4ycg (Zn: 10) - Pro-Bone Morphogenetic Protein 9
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4yci (Zn: 10) - Non-Latent Pro-Bone Morphogenetic Protein 9
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4yde (Zn: 1) - Crystal Structure of Candida Albicans Protein Farnesyltransferase Binary Complex with the Isoprenoid Farnesyldiphosphate
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4ydo (Zn: 1) - Crystal Structure of Candida Albicans Protein Farnesyltransferase in Apo Form
Other atoms:
Ca (2);
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4yf4 (Zn: 4) - Crystal Structure of RV1284 in the Presence of Polycarpine at Mildly Acidic pH
Other atoms:
Mg (4);
Cl (2);
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4yf5 (Zn: 2) - Crystal Structure of RV1284 in the Presence of Polycarpine at Acidic pH
Other atoms:
Cl (2);
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4yf6 (Zn: 4) - Crystal Structure of Oxidised RV1284
Other atoms:
Mg (2);
Cl (2);
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4yfk (Zn: 4) - Escherichia Coli Rna Polymerase in Complex with Squaramide Compound 8.
Other atoms:
Mg (4);
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4yfn (Zn: 4) - Escherichia Coli Rna Polymerase in Complex with Squaramide Compound 14 (N-[3,4-Dioxo-2-(4-{[4-(Trifluoromethyl)Benzyl]Amino}Piperidin-1-Yl) Cyclobut-1-En-1-Yl]-3,5-Dimethyl-1,2-Oxazole-4-Sulfonamide)
Other atoms:
F (6);
Mg (2);
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4yfx (Zn: 4) - Escherichia Coli Rna Polymerase in Complex with Myxopyronin B
Other atoms:
Mg (2);
Page generated: Mon Dec 15 11:33:53 2025
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