Zinc in PDB 9f9u: Crystal Structure of Saccharolobus Solfataricus NUSA2

Protein crystallography data

The structure of Crystal Structure of Saccharolobus Solfataricus NUSA2, PDB code: 9f9u was solved by S.Pilottto, D.K.Phung, F.Werner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.72 / 1.68
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 35.467, 72.813, 41.746, 90, 111.95, 90
R / Rfree (%) 21.6 / 23.6

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Saccharolobus Solfataricus NUSA2 (pdb code 9f9u). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Saccharolobus Solfataricus NUSA2, PDB code: 9f9u:

Zinc binding site 1 out of 1 in 9f9u

Go back to Zinc Binding Sites List in 9f9u
Zinc binding site 1 out of 1 in the Crystal Structure of Saccharolobus Solfataricus NUSA2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Saccharolobus Solfataricus NUSA2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:25.6
occ:1.00
SG A:CYS11 2.3 21.8 1.0
SG A:CYS18 2.3 24.2 1.0
SG A:CYS21 2.3 26.7 1.0
OD2 A:ASP8 2.3 28.5 1.0
CB A:CYS18 3.2 27.1 1.0
CB A:CYS21 3.2 20.7 1.0
CB A:CYS11 3.3 28.0 1.0
CG A:ASP8 3.3 25.7 1.0
CB A:ASP8 3.5 23.9 1.0
N A:CYS18 3.7 27.7 1.0
N A:CYS21 3.9 25.5 1.0
CA A:CYS18 4.0 26.5 1.0
N A:ASP8 4.1 22.5 1.0
CA A:CYS21 4.2 26.2 1.0
NH2 A:ARG20 4.4 26.3 1.0
CA A:ASP8 4.4 21.1 1.0
OD1 A:ASP8 4.5 26.7 1.0
C A:CYS18 4.5 25.5 1.0
CA A:CYS11 4.7 23.2 1.0
O A:CYS18 4.7 23.9 1.0
C A:LEU17 4.8 28.1 1.0
O A:HOH358 4.8 30.9 1.0
N A:CYS11 4.9 25.9 1.0
CB A:ARG20 4.9 27.2 1.0

Reference:

D.K.Phung, S.Pilottto, D.Matelska, F.Blombach, N.Pinotsis, L.Hovan, F.L.Gervasio, F.Werner. Archaeal NUSA2 Is the Evolutionary Precursor of the Ribosomal Protein ES7 in Eukaryotes Structure 2024.
ISSN: ISSN 0969-2126
Page generated: Thu Oct 31 15:31:39 2024

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