Zinc in PDB 9erd: Human SLFN11 S753D Monomer

The structure of Human SLFN11 S753D Monomer also contains other interesting chemical elements:

Magnesium

(Mg)

2 atoms

The binding sites of Zinc atom in the Human SLFN11 S753D Monomer (pdb code 9erd). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Human SLFN11 S753D Monomer, PDB code: 9erd:

Zinc binding site 1 out of 1 in the Human SLFN11 S753D Monomer


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Human SLFN11 S753D Monomer within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1004 b:145.5 occ:1.00 ND1 A:HIS285 2.1 103.2 1.0 SG A:CYS322 2.3 101.0 1.0 SG A:CYS321 2.3 101.3 1.0 SG A:CYS287 2.3 118.6 1.0 CE1 A:HIS285 2.8 103.2 1.0 CG A:HIS285 3.3 103.2 1.0 CB A:CYS321 3.6 101.3 1.0 CB A:CYS322 3.6 101.0 1.0 CB A:HIS285 3.8 103.2 1.0 CB A:CYS287 3.9 118.6 1.0 C A:CYS321 4.0 101.3 1.0 NE2 A:HIS285 4.0 103.2 1.0 N A:CYS322 4.1 101.0 1.0 O A:CYS321 4.2 101.3 1.0 CD2 A:HIS285 4.3 103.2 1.0 N A:CYS287 4.3 118.6 1.0 CA A:CYS321 4.4 101.3 1.0 CA A:HIS285 4.4 103.2 1.0 CA A:CYS322 4.5 101.0 1.0 CA A:CYS287 4.5 118.6 1.0 NH1 A:ARG291 4.7 115.9 1.0 C A:CYS287 4.7 118.6 1.0 O A:CYS287 4.7 118.6 1.0 N A:PHE286 4.8 108.0 1.0 O A:PRO289 5.0 122.8 1.0

M.Kugler, F.J.Metzner, K.P.Hopfner, K.Lammens. Phosphorylation-Mediated Conformational Change Regulates Human SLFN11 Nat Commun 2024.
ISSN: ESSN 2041-1723
DOI: 10.1038/S41467-024-54833-7