Zinc in PDB 9avt: Structure of TAB2 Nzf Domain Bound to K6 / LYS6-Linked Diubiquitin

The structure of Structure of TAB2 Nzf Domain Bound to K6 / LYS6-Linked Diubiquitin, PDB code: 9avt was solved by M.A.Michel, S.Scutts, D.Komander, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.02 / 1.50
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	90.323, 90.323, 86.335, 90, 90, 120
R / Rfree (%)	18.2 / 20.3

The binding sites of Zinc atom in the Structure of TAB2 Nzf Domain Bound to K6 / LYS6-Linked Diubiquitin (pdb code 9avt). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of TAB2 Nzf Domain Bound to K6 / LYS6-Linked Diubiquitin, PDB code: 9avt:

Zinc binding site 1 out of 1 in the Structure of TAB2 Nzf Domain Bound to K6 / LYS6-Linked Diubiquitin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of TAB2 Nzf Domain Bound to K6 / LYS6-Linked Diubiquitin within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn702 b:18.6 occ:1.00 SG C:CYS687 2.3 20.4 1.0 SG C:CYS673 2.3 18.2 1.0 SG C:CYS684 2.4 17.0 1.0 SG C:CYS670 2.4 18.0 1.0 CB C:CYS684 3.1 16.9 1.0 CB C:CYS670 3.1 16.2 1.0 CB C:CYS673 3.3 18.3 1.0 CB C:CYS687 3.4 21.8 1.0 N C:CYS673 3.8 18.0 1.0 N C:CYS687 3.8 22.2 1.0 CA C:CYS673 4.1 19.2 1.0 CA C:CYS687 4.2 24.3 1.0 CB C:GLN686 4.5 21.4 1.0 CB C:ALA672 4.6 25.8 1.0 CA C:CYS670 4.6 15.8 1.0 CA C:CYS684 4.6 18.1 1.0 CB C:MET689 4.6 30.2 1.0 C C:CYS673 4.7 17.8 1.0 C C:ALA672 4.8 20.5 1.0 CB C:PHE675 4.8 17.6 1.0 N C:THR674 4.9 17.7 1.0 C C:CYS687 4.9 27.1 1.0 C C:GLN686 4.9 24.3 1.0 N C:PHE675 4.9 16.2 1.0 O C:HOH807 4.9 29.7 1.0

M.A.Michel, S.Scutts, D.Komander. Structure of TAB2 Nzf Domain Bound to K6 / LYS6-Linked Diubiquitin To Be Published.