Zinc in PDB 8zae: Crystal Structure of RUABA3 From Rutstroemia Sp. Njr-2017A WRK4 in Complex with Fspp

The structure of Crystal Structure of RUABA3 From Rutstroemia Sp. Njr-2017A WRK4 in Complex with Fspp, PDB code: 8zae was solved by S.Y.Li, H.Li, Y.Yang, J.-W.Huang, C.-C.Chen, R.-T.Guo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.03 / 2.28
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	51.765, 89.475, 142.712, 90, 90, 90
R / Rfree (%)	17.7 / 25

The structure of Crystal Structure of RUABA3 From Rutstroemia Sp. Njr-2017A WRK4 in Complex with Fspp also contains other interesting chemical elements:

Magnesium

(Mg)

2 atoms

The binding sites of Zinc atom in the Crystal Structure of RUABA3 From Rutstroemia Sp. Njr-2017A WRK4 in Complex with Fspp (pdb code 8zae). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of RUABA3 From Rutstroemia Sp. Njr-2017A WRK4 in Complex with Fspp, PDB code: 8zae:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of RUABA3 From Rutstroemia Sp. Njr-2017A WRK4 in Complex with Fspp


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of RUABA3 From Rutstroemia Sp. Njr-2017A WRK4 in Complex with Fspp within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn502 b:44.6 occ:1.00 SG A:CYS386 2.3 41.8 1.0 SG A:CYS409 2.3 35.0 1.0 SG A:CYS389 2.3 40.9 1.0 SG A:CYS412 2.3 35.9 1.0 CB A:CYS386 3.1 42.5 1.0 CB A:CYS412 3.2 33.9 1.0 CB A:CYS389 3.5 45.5 1.0 N A:CYS389 3.5 45.5 1.0 CB A:CYS409 3.8 34.9 1.0 CA A:CYS389 3.9 47.6 1.0 N A:CYS409 4.0 33.4 1.0 CA A:CYS412 4.3 35.7 1.0 N A:CYS412 4.3 32.1 1.0 CA A:CYS409 4.4 33.7 1.0 C A:LYS388 4.5 47.5 1.0 CA A:CYS386 4.6 39.5 1.0 O A:HOH677 4.6 36.7 1.0 CB A:LYS388 4.7 52.9 1.0 N A:LYS388 4.7 48.7 1.0 O A:CYS409 4.8 29.9 1.0 NZ A:LYS388 4.9 81.1 1.0 CA A:LYS388 4.9 50.2 1.0 C A:CYS409 4.9 32.7 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of RUABA3 From Rutstroemia Sp. Njr-2017A WRK4 in Complex with Fspp


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of RUABA3 From Rutstroemia Sp. Njr-2017A WRK4 in Complex with Fspp within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn502 b:66.8 occ:1.00 SG B:CYS389 2.2 65.5 1.0 SG B:CYS386 2.3 50.5 1.0 SG B:CYS412 2.4 52.0 1.0 SG B:CYS409 2.4 60.9 1.0 CB B:CYS386 3.2 58.6 1.0 CB B:CYS412 3.3 54.5 1.0 CB B:CYS389 3.3 60.4 1.0 N B:CYS389 3.5 65.3 1.0 CB B:CYS409 3.6 59.9 1.0 CA B:CYS389 3.8 63.4 1.0 N B:CYS409 4.0 62.7 1.0 CA B:CYS409 4.3 62.4 1.0 N B:CYS412 4.3 59.6 1.0 CA B:CYS412 4.4 58.9 1.0 OE2 B:GLU411 4.5 84.0 1.0 C B:LYS388 4.5 73.9 1.0 CA B:CYS386 4.6 54.8 1.0 CB B:LYS388 4.6 81.5 1.0 CA B:LYS388 4.9 78.0 1.0 N B:LYS388 4.9 77.2 1.0 C B:CYS409 5.0 65.2 1.0

S.Y.Li, H.Li, Y.Yang, J.-W.Huang, C.-C.Chen, R.-T.Guo. Crystal Structure of RUABA3 From Rutstroemia Sp. Njr-2017A WRK4 To Be Published.