Zinc in PDB 8z4b: Crystal Structure of LYSB22-ASPB28 Insulin Analog at Ambient Structure

Protein crystallography data

The structure of Crystal Structure of LYSB22-ASPB28 Insulin Analog at Ambient Structure, PDB code: 8z4b was solved by E.Ayan, H.Demirci, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.35 / 2.50
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 80.376, 80.376, 38.04, 90, 90, 120
R / Rfree (%) 30 / 35.7

Other elements in 8z4b:

The structure of Crystal Structure of LYSB22-ASPB28 Insulin Analog at Ambient Structure also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of LYSB22-ASPB28 Insulin Analog at Ambient Structure (pdb code 8z4b). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of LYSB22-ASPB28 Insulin Analog at Ambient Structure, PDB code: 8z4b:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 8z4b

Go back to Zinc Binding Sites List in 8z4b
Zinc binding site 1 out of 2 in the Crystal Structure of LYSB22-ASPB28 Insulin Analog at Ambient Structure


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of LYSB22-ASPB28 Insulin Analog at Ambient Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn101

b:121.0
occ:0.00
NE2 B:HIS10 2.3 42.6 1.0
CL B:CL102 2.5 58.3 0.3
CE1 B:HIS10 3.1 39.5 1.0
CD2 B:HIS10 3.3 38.2 1.0
ND1 B:HIS10 4.3 37.6 1.0
CG B:HIS10 4.4 34.7 1.0

Zinc binding site 2 out of 2 in 8z4b

Go back to Zinc Binding Sites List in 8z4b
Zinc binding site 2 out of 2 in the Crystal Structure of LYSB22-ASPB28 Insulin Analog at Ambient Structure


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of LYSB22-ASPB28 Insulin Analog at Ambient Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn101

b:54.9
occ:0.28
NE2 D:HIS10 2.3 28.6 1.0
CL D:CL102 2.5 68.7 0.0
CD2 D:HIS10 3.1 28.8 1.0
CE1 D:HIS10 3.4 30.6 1.0
CB D:LEU6 4.1 29.1 1.0
O D:LEU6 4.2 28.4 1.0
CG D:HIS10 4.4 24.2 1.0
ND1 D:HIS10 4.4 24.5 1.0
C D:LEU6 4.7 27.4 1.0
CA D:LEU6 4.9 27.0 1.0
CD1 D:LEU6 4.9 27.0 1.0

Reference:

E.Ayan, H.Demirci. Crystal Structure of LYSB22-ASPB28 Insulin Analog at Ambient Structure To Be Published.
Page generated: Thu Oct 31 14:08:56 2024

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