Zinc in PDB 8xxw: Fab M2-7 Complexed with Sars-COV2 Rbd and Human ACE2

The binding sites of Zinc atom in the Fab M2-7 Complexed with Sars-COV2 Rbd and Human ACE2 (pdb code 8xxw). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Fab M2-7 Complexed with Sars-COV2 Rbd and Human ACE2, PDB code: 8xxw:

Zinc binding site 1 out of 1 in the Fab M2-7 Complexed with Sars-COV2 Rbd and Human ACE2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Fab M2-7 Complexed with Sars-COV2 Rbd and Human ACE2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn901 b:148.2 occ:1.00 NE2 A:HIS374 2.3 42.5 1.0 NE2 A:HIS378 2.3 45.0 1.0 CD2 A:HIS378 3.2 39.2 1.0 CD2 A:HIS374 3.3 41.1 1.0 CE1 A:HIS374 3.3 41.3 1.0 CE1 A:HIS378 3.3 43.1 1.0 CB A:GLU402 4.4 49.1 1.0 CG A:GLU402 4.4 54.9 1.0 ND1 A:HIS374 4.4 33.8 1.0 ND1 A:HIS378 4.4 37.6 1.0 CG A:HIS374 4.4 32.5 1.0 CG A:HIS378 4.4 30.8 1.0 CA A:GLU402 4.5 48.2 1.0 OE2 A:GLU375 4.8 42.2 1.0

C.Liu, S.Xu, Y.Zheng, Y.Xie, K.Xu, Y.Chai, T.Luo, L.Dai, G.F.Gao. Mosaic Rbd Nanoparticle Elicits Immunodominant Antibody Responses Across Sarbecoviruses. Cell Rep V. 43 14235 2024.
ISSN: ESSN 2211-1247
PubMed: 38748880
DOI: 10.1016/J.CELREP.2024.114235