Atomistry » Zinc » PDB 8xf8-8yhd » 8xxw
Atomistry »
  Zinc »
    PDB 8xf8-8yhd »
      8xxw »

Zinc in PDB 8xxw: Fab M2-7 Complexed with Sars-COV2 Rbd and Human ACE2

Zinc Binding Sites:

The binding sites of Zinc atom in the Fab M2-7 Complexed with Sars-COV2 Rbd and Human ACE2 (pdb code 8xxw). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Fab M2-7 Complexed with Sars-COV2 Rbd and Human ACE2, PDB code: 8xxw:

Zinc binding site 1 out of 1 in 8xxw

Go back to Zinc Binding Sites List in 8xxw
Zinc binding site 1 out of 1 in the Fab M2-7 Complexed with Sars-COV2 Rbd and Human ACE2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Fab M2-7 Complexed with Sars-COV2 Rbd and Human ACE2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn901

b:148.2
occ:1.00
NE2 A:HIS374 2.3 42.5 1.0
NE2 A:HIS378 2.3 45.0 1.0
CD2 A:HIS378 3.2 39.2 1.0
CD2 A:HIS374 3.3 41.1 1.0
CE1 A:HIS374 3.3 41.3 1.0
CE1 A:HIS378 3.3 43.1 1.0
CB A:GLU402 4.4 49.1 1.0
CG A:GLU402 4.4 54.9 1.0
ND1 A:HIS374 4.4 33.8 1.0
ND1 A:HIS378 4.4 37.6 1.0
CG A:HIS374 4.4 32.5 1.0
CG A:HIS378 4.4 30.8 1.0
CA A:GLU402 4.5 48.2 1.0
OE2 A:GLU375 4.8 42.2 1.0

Reference:

C.Liu, S.Xu, Y.Zheng, Y.Xie, K.Xu, Y.Chai, T.Luo, L.Dai, G.F.Gao. Mosaic Rbd Nanoparticle Elicits Immunodominant Antibody Responses Across Sarbecoviruses. Cell Rep V. 43 14235 2024.
ISSN: ESSN 2211-1247
PubMed: 38748880
DOI: 10.1016/J.CELREP.2024.114235
Page generated: Thu Oct 31 13:56:59 2024

Last articles

W in 8QLN
W in 8RJA
V in 8WTN
Te in 8QLN
Re in 9GHX
Rb in 8Z5C
Ni in 9C0T
Ni in 9C0S
Ni in 9GP1
Ni in 9FYO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy