Zinc in PDB 8vc5: Crystal Structure of Glutamyl-Trna Synthetase Glurs From Pseudomonas Aeruginosa (Zinc Bound)

All present enzymatic activity of Crystal Structure of Glutamyl-Trna Synthetase Glurs From Pseudomonas Aeruginosa (Zinc Bound):
6.1.1.17;

The structure of Crystal Structure of Glutamyl-Trna Synthetase Glurs From Pseudomonas Aeruginosa (Zinc Bound), PDB code: 8vc5 was solved by Seattle Structural Genomics Center For Infectious Disease, Seattlestructural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.33 / 2.30
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	46.814, 134.833, 181.625, 90, 90, 90
R / Rfree (%)	20.8 / 25.6

The binding sites of Zinc atom in the Crystal Structure of Glutamyl-Trna Synthetase Glurs From Pseudomonas Aeruginosa (Zinc Bound) (pdb code 8vc5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Glutamyl-Trna Synthetase Glurs From Pseudomonas Aeruginosa (Zinc Bound), PDB code: 8vc5:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of Glutamyl-Trna Synthetase Glurs From Pseudomonas Aeruginosa (Zinc Bound)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Glutamyl-Trna Synthetase Glurs From Pseudomonas Aeruginosa (Zinc Bound) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn504 b:59.2 occ:1.00 OH A:TYR130 2.0 62.8 1.0 SG A:CYS109 2.3 66.2 1.0 SG A:CYS134 2.3 67.7 1.0 SG A:CYS107 2.3 55.1 1.0 CZ A:TYR130 2.9 63.5 1.0 CB A:CYS134 3.1 57.6 1.0 CE1 A:TYR130 3.2 63.4 1.0 CB A:CYS109 3.2 67.8 1.0 CB A:CYS107 3.3 56.7 1.0 N A:CYS109 3.5 61.9 1.0 N A:CYS134 3.7 66.8 1.0 CA A:CYS107 3.7 51.7 1.0 N A:PHE108 3.8 57.1 1.0 CA A:CYS109 3.9 66.9 1.0 CA A:CYS134 4.0 65.2 1.0 C A:CYS107 4.1 61.5 1.0 CE2 A:TYR130 4.1 62.2 1.0 O A:HOH660 4.3 63.3 1.0 CB A:HIS133 4.4 65.0 1.0 ND1 A:HIS133 4.5 70.0 1.0 CD1 A:TYR130 4.5 60.4 1.0 C A:PHE108 4.5 67.2 1.0 C A:HIS133 4.8 69.8 1.0 CA A:PHE108 4.8 62.1 1.0 NE A:ARG155 5.0 57.5 1.0 CG A:HIS133 5.0 72.0 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of Glutamyl-Trna Synthetase Glurs From Pseudomonas Aeruginosa (Zinc Bound)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Glutamyl-Trna Synthetase Glurs From Pseudomonas Aeruginosa (Zinc Bound) within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn504 b:75.0 occ:1.00 OH B:TYR130 2.0 78.4 1.0 SG B:CYS109 2.3 64.3 1.0 SG B:CYS134 2.3 78.2 1.0 SG B:CYS107 2.3 69.1 1.0 CZ B:TYR130 3.1 79.7 1.0 CB B:CYS134 3.2 85.1 1.0 CB B:CYS107 3.3 63.2 1.0 CB B:CYS109 3.5 82.1 1.0 CE1 B:TYR130 3.5 75.5 1.0 N B:CYS134 3.6 83.3 1.0 N B:CYS109 3.7 80.5 1.0 CA B:CYS107 3.7 72.1 1.0 N B:PHE108 3.9 74.0 1.0 CA B:CYS134 4.1 82.2 1.0 CA B:CYS109 4.2 84.6 1.0 C B:CYS107 4.2 74.6 1.0 CE2 B:TYR130 4.2 81.6 1.0 CB B:HIS133 4.3 83.4 1.0 CD2 B:HIS133 4.5 89.6 1.0 C B:HIS133 4.7 88.0 1.0 C B:PHE108 4.7 79.4 1.0 CG B:HIS133 4.8 86.8 1.0 NH1 B:ARG155 4.8 77.2 1.0 CA B:HIS133 4.9 83.2 1.0 CD1 B:TYR130 4.9 77.5 1.0 CA B:PHE108 4.9 77.6 1.0 N B:HIS133 4.9 76.9 1.0

S.Seibold, S.Lovell, K.P.Battaile, M.Fenwick. Crystal Structure of Glutamyl-Trna Synthetase Glurs From Pseudomonas Aeruginosa (Zinc Bound) To Be Published.