Zinc in PDB 8t41: Crystal Structure of Aminopeptidase N From Mycobacterium Tuberculosis

Protein crystallography data

The structure of Crystal Structure of Aminopeptidase N From Mycobacterium Tuberculosis, PDB code: 8t41 was solved by H.W.Park, D.L.Moss, S.J.Landry, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 140.45 / 1.45
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 283.588, 56.747, 58.138, 90, 97.88, 90
R / Rfree (%) 14.3 / 16.6

Other elements in 8t41:

The structure of Crystal Structure of Aminopeptidase N From Mycobacterium Tuberculosis also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Aminopeptidase N From Mycobacterium Tuberculosis (pdb code 8t41). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Aminopeptidase N From Mycobacterium Tuberculosis, PDB code: 8t41:

Zinc binding site 1 out of 1 in 8t41

Go back to Zinc Binding Sites List in 8t41
Zinc binding site 1 out of 1 in the Crystal Structure of Aminopeptidase N From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Aminopeptidase N From Mycobacterium Tuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn901

b:10.2
occ:1.00
O A:HOH1271 2.0 14.3 1.0
OE2 A:GLU322 2.0 9.6 1.0
NE2 A:HIS303 2.0 8.0 1.0
NE2 A:HIS299 2.0 9.0 1.0
O A:HOH1225 2.5 17.4 1.0
CD A:GLU322 2.8 10.0 1.0
CE1 A:HIS303 2.9 8.8 1.0
CD2 A:HIS299 3.0 8.7 1.0
OE1 A:GLU322 3.0 11.4 1.0
CE1 A:HIS299 3.1 9.4 1.0
CD2 A:HIS303 3.1 9.9 1.0
O A:HOH1133 3.8 14.8 1.0
CE2 A:TYR385 3.8 9.9 1.0
OH A:TYR385 4.0 12.2 1.0
ND1 A:HIS303 4.1 10.5 1.0
CG A:HIS299 4.1 8.2 1.0
ND1 A:HIS299 4.2 9.7 1.0
CG A:HIS303 4.2 9.6 1.0
CG A:GLU322 4.2 9.2 1.0
CZ A:TYR385 4.2 11.8 1.0
OE2 A:GLU268 4.3 10.7 1.0
CB A:ALA325 4.5 10.6 1.0
CA A:GLU322 4.6 9.1 1.0
CB A:GLU322 4.7 10.0 1.0
OE2 A:GLU300 4.7 17.5 1.0
OE1 A:GLU300 4.8 14.2 1.0
CD2 A:TYR385 4.8 9.9 1.0
CD A:GLU268 4.8 10.9 1.0
OE1 A:GLU268 4.9 11.2 1.0
O A:HOH1051 5.0 10.7 1.0

Reference:

H.W.Park, D.L.Moss, S.J.Landry. Crystal Structure of Aminopeptidase N From Mycobacterium Tuberculosis To Be Published.
Page generated: Thu Oct 31 11:25:54 2024

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