Zinc in PDB 8rg0: Structure of Human EIF3 Core From Closed 48S Translation Initiation Complex

All present enzymatic activity of Structure of Human EIF3 Core From Closed 48S Translation Initiation Complex:
3.4.19.12;

The structure of Structure of Human EIF3 Core From Closed 48S Translation Initiation Complex also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

The binding sites of Zinc atom in the Structure of Human EIF3 Core From Closed 48S Translation Initiation Complex (pdb code 8rg0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of Human EIF3 Core From Closed 48S Translation Initiation Complex, PDB code: 8rg0:

Zinc binding site 1 out of 1 in the Structure of Human EIF3 Core From Closed 48S Translation Initiation Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Human EIF3 Core From Closed 48S Translation Initiation Complex within 5.0Å range: probe atom residue distance (Å) B Occ Q:Zn201 b:180.2 occ:1.00 CB Q:CYS26 2.3 138.5 1.0 SG Q:CYS23 2.3 130.0 1.0 SG Q:CYS26 2.3 138.5 1.0 SG Q:CYS77 2.4 133.6 1.0 SG Q:CYS74 2.4 127.7 1.0 CB Q:CYS77 2.5 133.6 1.0 CB Q:CYS74 3.1 127.7 1.0 CB Q:CYS23 3.2 130.0 1.0 N Q:CYS26 3.2 138.5 1.0 CA Q:CYS26 3.3 138.5 1.0 N Q:CYS74 3.5 127.7 1.0 CA Q:CYS77 3.9 133.6 1.0 CA Q:CYS74 3.9 127.7 1.0 N Q:CYS77 4.3 133.6 1.0 C Q:CYS26 4.4 138.5 1.0 C Q:ASN25 4.5 124.0 1.0 C Q:TYR73 4.5 128.0 1.0 CA Q:CYS23 4.7 130.0 1.0 CA Q:TYR73 4.7 128.0 1.0 N Q:ALA27 4.7 140.5 1.0 C Q:CYS74 4.9 127.7 1.0 CB Q:ASN25 4.9 124.0 1.0 N Q:ARG28 4.9 153.2 1.0 N Q:ASN25 4.9 124.0 1.0 C Q:CYS77 5.0 133.6 1.0

V.Petrychenko, S.-H.Yi, D.Liedtke, B.Z.Peng, M.V.Rodnina, N.Fischer. Structural Basis For Translational Control By the Human 48S Initiation Complex From Codon Scanning Toward Subunit Joining Nat.Struct.Mol.Biol. 2024.
ISSN: ESSN 1545-9985
DOI: 10.1038/S41594-024-01378-4