Zinc in PDB 8r6f: Cryoem Structure of Wheat 40S Ribosomal Subunit, Body Domain

The structure of Cryoem Structure of Wheat 40S Ribosomal Subunit, Body Domain also contains other interesting chemical elements:

Potassium	(K)	14 atoms
Magnesium	(Mg)	32 atoms

The binding sites of Zinc atom in the Cryoem Structure of Wheat 40S Ribosomal Subunit, Body Domain (pdb code 8r6f). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryoem Structure of Wheat 40S Ribosomal Subunit, Body Domain, PDB code: 8r6f:

Zinc binding site 1 out of 1 in the Cryoem Structure of Wheat 40S Ribosomal Subunit, Body Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryoem Structure of Wheat 40S Ribosomal Subunit, Body Domain within 5.0Å range: probe atom residue distance (Å) B Occ a:Zn201 b:61.5 occ:1.00 SG a:CYS26 1.9 30.6 1.0 SG a:CYS74 2.1 23.0 1.0 SG a:CYS23 2.4 28.1 1.0 SG a:CYS77 2.5 23.8 1.0 CB a:CYS77 3.1 23.8 1.0 CB a:CYS23 3.3 28.1 1.0 CB a:CYS26 3.4 30.6 1.0 CB a:CYS74 3.6 23.0 1.0 N a:CYS26 3.8 30.6 1.0 N a:CYS74 4.1 23.0 1.0 N a:CYS77 4.1 23.8 1.0 CA a:CYS26 4.2 30.6 1.0 CA a:CYS77 4.2 23.8 1.0 CB a:LYS28 4.3 26.5 1.0 O a:HOH308 4.3 21.9 1.0 CA a:CYS74 4.4 23.0 1.0 CB a:ASN25 4.5 32.0 1.0 CA a:CYS23 4.7 28.1 1.0 C a:CYS26 4.8 30.6 1.0 C a:ASN25 4.9 32.0 1.0 N a:LYS28 4.9 26.5 1.0 C a:CYS74 5.0 23.0 1.0

O.V.Kravchenko, T.N.Baymukhametov, Z.A.Afonina, K.S.Vassilenko. High-Resolution Structure and Internal Mobility of A Plant 40S Ribosomal Subunit Int J Mol Sci V. 24 2023.
ISSN: ESSN 1422-0067
DOI: 10.3390/IJMS242417453