Zinc in PDB 8k4u: Structure of BTKY72 Spike Receptor-Binding Domain (Rbd) Complexed with Bat ACE2

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of BTKY72 Spike Receptor-Binding Domain (Rbd) Complexed with Bat ACE2 (pdb code 8k4u). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of BTKY72 Spike Receptor-Binding Domain (Rbd) Complexed with Bat ACE2, PDB code: 8k4u:

Zinc binding site 1 out of 1 in 8k4u

Go back to Zinc Binding Sites List in 8k4u
Zinc binding site 1 out of 1 in the Structure of BTKY72 Spike Receptor-Binding Domain (Rbd) Complexed with Bat ACE2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of BTKY72 Spike Receptor-Binding Domain (Rbd) Complexed with Bat ACE2 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn701

b:60.1
occ:1.00
NE2 B:HIS378 2.1 36.6 1.0
OE2 B:GLU402 2.1 32.3 1.0
NE2 B:HIS374 2.1 40.2 1.0
CE1 B:HIS374 2.6 40.2 1.0
CD B:GLU402 2.8 32.3 1.0
CE1 B:HIS378 2.9 36.6 1.0
OE1 B:GLU402 3.1 32.3 1.0
CD2 B:HIS374 3.1 40.2 1.0
CD2 B:HIS378 3.3 36.6 1.0
ND1 B:HIS374 3.7 40.2 1.0
CG B:HIS374 4.0 40.2 1.0
OE2 B:GLU375 4.0 45.4 1.0
ND1 B:HIS378 4.1 36.6 1.0
CG B:GLU402 4.1 32.3 1.0
CG B:HIS378 4.3 36.6 1.0
CB B:GLU402 4.8 32.3 1.0
CA B:GLU402 4.9 32.3 1.0
O B:HIS374 4.9 40.2 1.0
CD B:GLU375 4.9 45.4 1.0

Reference:

C.Su, J.H.He, J.X.Qi, M.S.Yang, Q.H.Wang, G.F.Gao. Structural Characteristics of BTKY72 Rbd Bound to Bat ACE2 Reveal Multiple Key Residues Affecting ACE2 Usage of Sarbecoviruses To Be Published.
Page generated: Thu Oct 31 08:33:38 2024

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