Zinc in PDB 8jsm: The Structure of Ebov L-VP35-Rna Complex (Conformation 1)

All present enzymatic activity of The Structure of Ebov L-VP35-Rna Complex (Conformation 1):
2.7.7.48; 2.7.7.88;

The binding sites of Zinc atom in the The Structure of Ebov L-VP35-Rna Complex (Conformation 1) (pdb code 8jsm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Structure of Ebov L-VP35-Rna Complex (Conformation 1), PDB code: 8jsm:

Zinc binding site 1 out of 1 in the The Structure of Ebov L-VP35-Rna Complex (Conformation 1)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Structure of Ebov L-VP35-Rna Complex (Conformation 1) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn2301 b:112.0 occ:1.00 ND1 A:HIS1345 2.0 62.1 1.0 NE2 A:HIS1347 2.0 66.8 1.0 SG A:CYS1150 2.3 96.8 1.0 SG A:CYS1153 2.3 94.7 1.0 CE1 A:HIS1347 3.0 66.8 1.0 CE1 A:HIS1345 3.0 62.1 1.0 CG A:HIS1345 3.0 62.1 1.0 CD2 A:HIS1347 3.1 66.8 1.0 CB A:CYS1150 3.1 96.8 1.0 CB A:HIS1345 3.4 62.1 1.0 CB A:CYS1153 3.5 94.7 1.0 N A:CYS1153 4.0 94.7 1.0 NE2 A:HIS1345 4.1 62.1 1.0 ND1 A:HIS1347 4.1 66.8 1.0 CD2 A:HIS1345 4.1 62.1 1.0 CG A:HIS1347 4.2 66.8 1.0 CA A:CYS1153 4.4 94.7 1.0 CA A:CYS1150 4.6 96.8 1.0 CD1 A:LEU1144 4.6 75.7 1.0 CB A:GLN1152 4.7 88.0 1.0 CG A:PHE1164 4.7 66.6 1.0 CD1 A:PHE1164 4.7 66.6 1.0 CG2 A:VAL1142 4.7 59.5 1.0 CA A:HIS1345 4.9 62.1 1.0 CD2 A:PHE1164 4.9 66.6 1.0 C A:GLN1152 4.9 88.0 1.0

Q.Peng, B.Yuan, J.Cheng, M.Wang, S.Gao, S.Bai, X.Zhao, J.Qi, G.F.Gao, Y.Shi. Molecular Mechanism of De Novo Replication By the Ebola Virus Polymerase. Nature 2023.
ISSN: ESSN 1476-4687
PubMed: 37699521
DOI: 10.1038/S41586-023-06608-1