Zinc in PDB 8jik: Alanine Decarboxylase

The structure of Alanine Decarboxylase, PDB code: 8jik was solved by W.Gong, H.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	17.62 / 2.60
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	163.996, 163.996, 50.209, 90, 90, 120
R / Rfree (%)	17.2 / 22.3

The structure of Alanine Decarboxylase also contains other interesting chemical elements:

Calcium

(Ca)

1 atom

The binding sites of Zinc atom in the Alanine Decarboxylase (pdb code 8jik). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Alanine Decarboxylase, PDB code: 8jik:

Zinc binding site 1 out of 1 in the Alanine Decarboxylase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Alanine Decarboxylase within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn503 b:43.8 occ:1.00 ND1 A:HIS477 2.0 45.8 1.0 SG A:CYS462 2.3 36.8 1.0 SG A:CYS474 2.3 42.4 1.0 SG A:CYS472 2.4 44.9 1.0 CE1 A:HIS477 3.0 44.0 1.0 CG A:HIS477 3.1 44.6 1.0 CB A:CYS462 3.2 35.7 1.0 CB A:CYS474 3.4 44.1 1.0 CB A:CYS472 3.4 42.0 1.0 CA A:CYS462 3.5 39.0 1.0 CB A:HIS477 3.5 46.9 1.0 NE2 A:HIS477 4.1 40.6 1.0 N A:LEU463 4.2 39.5 1.0 C A:CYS462 4.2 36.8 1.0 CD2 A:HIS477 4.2 45.0 1.0 CB A:ALA464 4.2 43.0 1.0 N A:ALA464 4.3 41.0 1.0 N A:CYS474 4.3 40.1 1.0 N A:HIS477 4.4 56.0 1.0 CA A:CYS474 4.4 44.8 1.0 CA A:HIS477 4.6 48.3 1.0 N A:CYS462 4.7 38.6 1.0 CA A:CYS472 4.7 40.5 1.0 CA A:ALA464 4.8 41.2 1.0 C A:CYS472 4.9 42.9 1.0

W.Gong, H.Wang. Crystal Structure of Alanine Decarboxylase To Be Published.