Zinc in PDB 8izl: Structure of the Mumps Virus L Protein Bound By Phosphoprotein Tetramer
Zinc Binding Sites:
The binding sites of Zinc atom in the Structure of the Mumps Virus L Protein Bound By Phosphoprotein Tetramer
(pdb code 8izl). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Structure of the Mumps Virus L Protein Bound By Phosphoprotein Tetramer, PDB code: 8izl:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 8izl
Go back to
Zinc Binding Sites List in 8izl
Zinc binding site 1 out
of 2 in the Structure of the Mumps Virus L Protein Bound By Phosphoprotein Tetramer
 Mono view
 Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Structure of the Mumps Virus L Protein Bound By Phosphoprotein Tetramer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn3001
b:145.3
occ:1.00
|
NE2
|
A:HIS1374
|
1.7
|
45.4
|
1.0
|
ND1
|
A:HIS1372
|
2.0
|
41.6
|
1.0
|
SG
|
A:CYS1187
|
2.1
|
62.0
|
1.0
|
CE1
|
A:HIS1374
|
2.5
|
45.4
|
1.0
|
SG
|
A:CYS1190
|
2.9
|
63.6
|
1.0
|
CD2
|
A:HIS1374
|
2.9
|
45.4
|
1.0
|
CE1
|
A:HIS1372
|
2.9
|
41.6
|
1.0
|
CG
|
A:HIS1372
|
3.0
|
41.6
|
1.0
|
CB
|
A:CYS1187
|
3.2
|
62.0
|
1.0
|
CB
|
A:CYS1190
|
3.2
|
63.6
|
1.0
|
CB
|
A:HIS1372
|
3.3
|
41.6
|
1.0
|
N
|
A:CYS1190
|
3.4
|
63.6
|
1.0
|
ND1
|
A:HIS1374
|
3.7
|
45.4
|
1.0
|
CA
|
A:CYS1190
|
3.9
|
63.6
|
1.0
|
CG
|
A:HIS1374
|
3.9
|
45.4
|
1.0
|
NE2
|
A:HIS1372
|
4.1
|
41.6
|
1.0
|
CD2
|
A:HIS1372
|
4.1
|
41.6
|
1.0
|
C
|
A:HIS1189
|
4.5
|
57.4
|
1.0
|
CB
|
A:HIS1189
|
4.5
|
57.4
|
1.0
|
CA
|
A:CYS1187
|
4.6
|
62.0
|
1.0
|
CD1
|
A:PHE1197
|
4.6
|
45.3
|
1.0
|
CG
|
A:PHE1197
|
4.7
|
45.3
|
1.0
|
CA
|
A:HIS1372
|
4.8
|
41.6
|
1.0
|
CA
|
A:HIS1189
|
4.8
|
57.4
|
1.0
|
N
|
A:HIS1189
|
4.8
|
57.4
|
1.0
|
C
|
A:CYS1187
|
4.9
|
62.0
|
1.0
|
CB
|
A:PHE1197
|
5.0
|
45.3
|
1.0
|
CE1
|
A:PHE1197
|
5.0
|
45.3
|
1.0
|
|
Zinc binding site 2 out
of 2 in 8izl
Go back to
Zinc Binding Sites List in 8izl
Zinc binding site 2 out
of 2 in the Structure of the Mumps Virus L Protein Bound By Phosphoprotein Tetramer
 Mono view
 Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Structure of the Mumps Virus L Protein Bound By Phosphoprotein Tetramer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn3002
b:149.6
occ:1.00
|
SG
|
A:CYS1142
|
1.9
|
49.7
|
1.0
|
SG
|
A:CYS1379
|
2.3
|
69.4
|
1.0
|
SG
|
A:CYS1380
|
2.3
|
66.6
|
1.0
|
OE2
|
A:GLU1174
|
2.7
|
46.0
|
1.0
|
N
|
A:CYS1380
|
2.9
|
66.6
|
1.0
|
CB
|
A:CYS1142
|
3.0
|
49.7
|
1.0
|
CB
|
A:CYS1380
|
3.3
|
66.6
|
1.0
|
CA
|
A:CYS1380
|
3.4
|
66.6
|
1.0
|
CB
|
A:CYS1379
|
3.4
|
69.4
|
1.0
|
C
|
A:CYS1379
|
3.6
|
69.4
|
1.0
|
CD
|
A:GLU1174
|
3.7
|
46.0
|
1.0
|
CA
|
A:CYS1142
|
3.8
|
49.7
|
1.0
|
CA
|
A:CYS1379
|
3.9
|
69.4
|
1.0
|
N
|
A:CYS1379
|
4.2
|
69.4
|
1.0
|
CG
|
A:GLU1174
|
4.4
|
46.0
|
1.0
|
O
|
A:CYS1379
|
4.5
|
69.4
|
1.0
|
NH2
|
A:ARG1382
|
4.5
|
64.7
|
1.0
|
N
|
A:SER1143
|
4.5
|
41.8
|
1.0
|
OE1
|
A:GLU1174
|
4.6
|
46.0
|
1.0
|
C
|
A:CYS1142
|
4.6
|
49.7
|
1.0
|
C
|
A:CYS1380
|
4.9
|
66.6
|
1.0
|
N
|
A:CYS1142
|
5.0
|
49.7
|
1.0
|
|
Reference:
T.L.Li,
Q.T.Shen.
Structural Insights Into Mumps Virus Polymerase Complex For Coordinating Replication and Transcription To Be Published.
Page generated: Thu Oct 31 08:00:39 2024
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