Zinc in PDB 8hip: Dsrna Transporter
Zinc Binding Sites:
The binding sites of Zinc atom in the Dsrna Transporter
(pdb code 8hip). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Dsrna Transporter, PDB code: 8hip:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 8hip
Go back to
Zinc Binding Sites List in 8hip
Zinc binding site 1 out
of 2 in the Dsrna Transporter
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Dsrna Transporter within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn803
b:30.0
occ:1.00
|
NE2
|
B:HIS540
|
2.2
|
23.6
|
1.0
|
NE2
|
B:HIS740
|
2.2
|
22.1
|
1.0
|
NE2
|
B:HIS744
|
2.2
|
20.9
|
1.0
|
OD2
|
B:ASP551
|
2.5
|
30.4
|
1.0
|
OD1
|
B:ASP551
|
2.6
|
30.4
|
1.0
|
CG
|
B:ASP551
|
2.9
|
30.4
|
1.0
|
CE1
|
B:HIS540
|
3.1
|
23.6
|
1.0
|
CE1
|
B:HIS744
|
3.1
|
20.9
|
1.0
|
CE1
|
B:HIS740
|
3.2
|
22.1
|
1.0
|
CD2
|
B:HIS740
|
3.2
|
22.1
|
1.0
|
CD2
|
B:HIS540
|
3.3
|
23.6
|
1.0
|
CD2
|
B:HIS744
|
3.3
|
20.9
|
1.0
|
ND1
|
B:HIS540
|
4.2
|
23.6
|
1.0
|
CB
|
B:SER536
|
4.2
|
22.5
|
1.0
|
ND1
|
B:HIS744
|
4.3
|
20.9
|
1.0
|
ND1
|
B:HIS740
|
4.3
|
22.1
|
1.0
|
CG
|
B:HIS740
|
4.3
|
22.1
|
1.0
|
OG
|
B:SER536
|
4.3
|
22.5
|
1.0
|
CG
|
B:HIS540
|
4.3
|
23.6
|
1.0
|
CG
|
B:HIS744
|
4.4
|
20.9
|
1.0
|
CB
|
B:ASP551
|
4.4
|
30.4
|
1.0
|
NE1
|
B:TRP743
|
4.6
|
22.4
|
1.0
|
CD1
|
B:TRP743
|
4.6
|
22.4
|
1.0
|
CD1
|
B:TYR539
|
4.7
|
26.5
|
1.0
|
O
|
B:SER536
|
4.9
|
22.5
|
1.0
|
CA
|
B:SER536
|
5.0
|
22.5
|
1.0
|
|
Zinc binding site 2 out
of 2 in 8hip
Go back to
Zinc Binding Sites List in 8hip
Zinc binding site 2 out
of 2 in the Dsrna Transporter
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Dsrna Transporter within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn803
b:30.0
occ:1.00
|
NE2
|
A:HIS540
|
2.2
|
23.6
|
1.0
|
NE2
|
A:HIS740
|
2.2
|
22.1
|
1.0
|
NE2
|
A:HIS744
|
2.2
|
20.9
|
1.0
|
OD2
|
A:ASP551
|
2.5
|
30.4
|
1.0
|
OD1
|
A:ASP551
|
2.6
|
30.4
|
1.0
|
CG
|
A:ASP551
|
2.9
|
30.4
|
1.0
|
CE1
|
A:HIS540
|
3.1
|
23.6
|
1.0
|
CE1
|
A:HIS744
|
3.1
|
20.9
|
1.0
|
CE1
|
A:HIS740
|
3.2
|
22.1
|
1.0
|
CD2
|
A:HIS740
|
3.2
|
22.1
|
1.0
|
CD2
|
A:HIS540
|
3.3
|
23.6
|
1.0
|
CD2
|
A:HIS744
|
3.3
|
20.9
|
1.0
|
ND1
|
A:HIS540
|
4.2
|
23.6
|
1.0
|
CB
|
A:SER536
|
4.2
|
22.5
|
1.0
|
ND1
|
A:HIS744
|
4.3
|
20.9
|
1.0
|
ND1
|
A:HIS740
|
4.3
|
22.1
|
1.0
|
CG
|
A:HIS740
|
4.3
|
22.1
|
1.0
|
OG
|
A:SER536
|
4.3
|
22.5
|
1.0
|
CG
|
A:HIS540
|
4.3
|
23.6
|
1.0
|
CG
|
A:HIS744
|
4.4
|
20.9
|
1.0
|
CB
|
A:ASP551
|
4.4
|
30.4
|
1.0
|
NE1
|
A:TRP743
|
4.6
|
22.4
|
1.0
|
CD1
|
A:TRP743
|
4.6
|
22.4
|
1.0
|
CD1
|
A:TYR539
|
4.7
|
26.5
|
1.0
|
O
|
A:SER536
|
4.9
|
22.5
|
1.0
|
CA
|
A:SER536
|
5.0
|
22.5
|
1.0
|
|
Reference:
D.H.Jiang,
J.T.Zhang.
Structure of Dsrna Transporter at 2.77 Angstroms Resolution. To Be Published.
Page generated: Thu Oct 31 07:18:00 2024
|