Zinc in PDB 8hfy: Sars-Cov-2 Omicron Ba.1 Spike Protein Receptor-Binding Domain in Complex with White-Tailed Deer ACE2

The binding sites of Zinc atom in the Sars-Cov-2 Omicron Ba.1 Spike Protein Receptor-Binding Domain in Complex with White-Tailed Deer ACE2 (pdb code 8hfy). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Sars-Cov-2 Omicron Ba.1 Spike Protein Receptor-Binding Domain in Complex with White-Tailed Deer ACE2, PDB code: 8hfy:

Zinc binding site 1 out of 1 in the Sars-Cov-2 Omicron Ba.1 Spike Protein Receptor-Binding Domain in Complex with White-Tailed Deer ACE2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Sars-Cov-2 Omicron Ba.1 Spike Protein Receptor-Binding Domain in Complex with White-Tailed Deer ACE2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn704 b:68.7 occ:1.00 OE2 A:GLU402 2.1 57.5 1.0 NE2 A:HIS374 2.3 57.5 1.0 NE2 A:HIS378 2.3 57.5 1.0 CD2 A:HIS374 3.0 57.5 1.0 CD A:GLU402 3.0 57.5 1.0 CD2 A:HIS378 3.0 57.5 1.0 CE1 A:HIS378 3.2 57.5 1.0 OE1 A:GLU402 3.2 57.5 1.0 CE1 A:HIS374 3.5 57.5 1.0 OE2 A:GLU375 4.1 57.5 1.0 CG A:HIS378 4.1 57.5 1.0 ND1 A:HIS378 4.2 57.5 1.0 CG A:HIS374 4.2 57.5 1.0 CG A:GLU402 4.4 57.5 1.0 ND1 A:HIS374 4.4 57.5 1.0 OE1 A:GLU375 4.7 57.5 1.0 CD A:GLU375 4.7 57.5 1.0

P.Han, Y.Meng, D.Zhang, Z.Xu, Z.Li, X.Pan, Z.Zhao, L.Li, L.Tang, J.Qi, K.Liu, G.F.Gao. Structural Basis of Sars-Cov-2 Binding to Ace 2 Receptor of White-Tailed Deer, Odocoileus Virginianus To Be Published.