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Zinc in PDB 8frj: Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC0946

Enzymatic activity of Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC0946

All present enzymatic activity of Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC0946:
2.1.1.56;

Protein crystallography data

The structure of Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC0946, PDB code: 8frj was solved by J.Kottur, A.K.Aggarwal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.31 / 1.57
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 109.155, 109.155, 48.64, 90, 90, 120
R / Rfree (%) 17 / 20.4

Other elements in 8frj:

The structure of Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC0946 also contains other interesting chemical elements:

Bromine (Br) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC0946 (pdb code 8frj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC0946, PDB code: 8frj:

Zinc binding site 1 out of 1 in 8frj

Go back to Zinc Binding Sites List in 8frj
Zinc binding site 1 out of 1 in the Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC0946


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC0946 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn601

b:17.4
occ:1.00
 ND1 A:HIS487 2.1 17.9 1.0
SG A:CYS477 2.2 20.0 1.0
SG A:CYS484 2.3 21.5 1.0
SG A:CYS452 2.3 21.1 1.0
HB3 A:CYS477 2.9 28.9 1.0
CE1 A:HIS487 3.0 12.8 1.0
HB2 A:HIS487 3.0 25.3 1.0
HB3 A:CYS452 3.0 28.0 1.0
HE1 A:HIS487 3.1 15.5 1.0
HA A:CYS452 3.1 33.1 1.0
CB A:CYS452 3.1 23.2 1.0
CB A:CYS477 3.2 24.0 1.0
H A:CYS484 3.2 27.0 1.0
CG A:HIS487 3.2 15.6 1.0
HB3 A:CYS484 3.2 31.1 1.0
CB A:CYS484 3.4 25.8 1.0
H A:CYS477 3.6 20.4 1.0
CB A:HIS487 3.6 20.9 1.0
CA A:CYS452 3.7 27.5 1.0
HB2 A:CYS477 3.7 28.9 1.0
HB A:THR475 3.9 26.3 1.0
H A:HIS487 3.9 22.6 1.0
N A:CYS484 4.0 22.4 1.0
HB2 A:CYS452 4.0 28.0 1.0
HB3 A:HIS487 4.1 25.3 1.0
HB2 A:CYS484 4.1 31.1 1.0
NE2 A:HIS487 4.2 15.3 1.0
H A:GLU453 4.3 21.4 1.0
CD2 A:HIS487 4.3 19.3 1.0
N A:CYS477 4.3 16.9 1.0
CA A:CYS484 4.3 23.6 1.0
HG1 A:THR475 4.3 21.3 1.0
CA A:CYS477 4.4 17.2 1.0
HG13 A:VAL483 4.4 25.8 1.0
N A:CYS452 4.5 22.2 1.0
N A:HIS487 4.6 18.7 1.0
CB A:THR475 4.7 21.8 1.0
OG1 A:THR475 4.7 17.6 1.0
HD2 A:HIS486 4.7 36.9 1.0
HA A:VAL483 4.7 26.9 1.0
CA A:HIS487 4.8 17.2 1.0
H A:CYS452 4.8 26.8 1.0
HG21 A:THR475 4.8 22.8 1.0
HB3 A:HIS486 4.8 40.7 1.0
C A:CYS452 4.8 21.1 1.0
N A:GLU453 4.8 17.7 1.0
O A:HOH767 4.9 16.4 1.0
HE2 A:HIS487 4.9 18.5 1.0
O A:HOH732 5.0 20.4 1.0
HB2 A:ARG476 5.0 28.1 0.4
HA A:CYS477 5.0 20.8 1.0
C A:CYS484 5.0 26.0 1.0

Reference:

J.Kottur, A.K.Aggarwal. Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC0946 To Be Published.
Page generated: Thu Dec 28 13:03:01 2023

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