Zinc in PDB 8fqz: Carbonic Anhydrase II in Complex with the Alkyl Urea 3J

Enzymatic activity of Carbonic Anhydrase II in Complex with the Alkyl Urea 3J

All present enzymatic activity of Carbonic Anhydrase II in Complex with the Alkyl Urea 3J:
4.2.1.1;

Protein crystallography data

The structure of Carbonic Anhydrase II in Complex with the Alkyl Urea 3J, PDB code: 8fqz was solved by J.C.Combs, R.Mckenna, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.50 / 1.47
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.277, 41.154, 71.914, 90, 104.26, 90
R / Rfree (%) 16.4 / 18.5

Zinc Binding Sites:

The binding sites of Zinc atom in the Carbonic Anhydrase II in Complex with the Alkyl Urea 3J (pdb code 8fqz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Carbonic Anhydrase II in Complex with the Alkyl Urea 3J, PDB code: 8fqz:

Zinc binding site 1 out of 1 in 8fqz

Go back to Zinc Binding Sites List in 8fqz
Zinc binding site 1 out of 1 in the Carbonic Anhydrase II in Complex with the Alkyl Urea 3J


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Carbonic Anhydrase II in Complex with the Alkyl Urea 3J within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:10.3
occ:1.00
NAJ A:N7S302 1.9 10.4 1.0
NE2 A:HIS96 2.0 9.2 1.0
NE2 A:HIS94 2.0 8.8 1.0
ND1 A:HIS119 2.1 10.6 1.0
CE1 A:HIS119 2.9 8.2 1.0
CD2 A:HIS96 2.9 9.2 1.0
CE1 A:HIS96 3.0 9.9 1.0
CD2 A:HIS94 3.0 9.8 1.0
CE1 A:HIS94 3.0 10.1 1.0
SAG A:N7S302 3.0 11.4 1.0
OAI A:N7S302 3.1 10.4 1.0
CG A:HIS119 3.2 9.6 1.0
CB A:HIS119 3.6 9.4 1.0
O A:HOH572 3.7 17.3 1.0
OG1 A:THR199 3.8 10.8 1.0
OE1 A:GLU106 4.0 10.7 1.0
NE2 A:HIS119 4.1 8.2 1.0
CG A:HIS96 4.1 10.4 1.0
ND1 A:HIS96 4.1 10.7 1.0
ND1 A:HIS94 4.1 11.3 1.0
CG A:HIS94 4.2 8.8 1.0
OAH A:N7S302 4.2 11.2 1.0
CD2 A:HIS119 4.2 10.3 1.0
CAE A:N7S302 4.3 10.3 1.0
O A:HOH618 4.7 25.2 1.0
CAD A:N7S302 4.8 13.9 1.0
CD A:GLU106 4.9 12.4 1.0

Reference:

J.Combs, M.Bozdag, L.D.Cravey, A.Kota, R.Mckenna, A.Angeli, F.Carta, C.T.Supuran. New Insights Into Conformationally Restricted Carbonic Anhydrase Inhibitors. Molecules V. 28 2023.
ISSN: ESSN 1420-3049
PubMed: 36677947
DOI: 10.3390/MOLECULES28020890
Page generated: Sat Apr 8 08:56:55 2023

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