Zinc in PDB 8ept: UBE3A Isoform 2 Azul Domain

All present enzymatic activity of UBE3A Isoform 2 Azul Domain:
2.3.2.26;

The binding sites of Zinc atom in the UBE3A Isoform 2 Azul Domain (pdb code 8ept). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the UBE3A Isoform 2 Azul Domain, PDB code: 8ept:

Zinc binding site 1 out of 1 in the UBE3A Isoform 2 Azul Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of UBE3A Isoform 2 Azul Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn101 b:0.0 occ:1.00 SG A:CYS57 2.3 0.0 1.0 SG A:CYS47 2.3 0.0 1.0 SG A:CYS52 2.3 0.0 1.0 SG A:CYS86 2.3 0.0 1.0 HB2 A:CYS86 3.3 0.0 1.0 HB3 A:CYS47 3.4 0.0 1.0 HB2 A:CYS52 3.4 0.0 1.0 CB A:CYS57 3.4 0.0 1.0 CB A:CYS86 3.5 0.0 1.0 HB3 A:CYS57 3.5 0.0 1.0 HB2 A:CYS57 3.5 0.0 1.0 CB A:CYS47 3.5 0.0 1.0 HG A:SER59 3.6 0.0 1.0 OG A:SER59 3.6 0.0 1.0 CB A:CYS52 3.6 0.0 1.0 HB3 A:CYS86 3.8 0.0 1.0 OE1 A:GLN42 3.9 0.0 1.0 HB2 A:ASN49 4.0 0.0 1.0 HB3 A:ASN54 4.2 0.0 1.0 HB2 A:CYS47 4.2 0.0 1.0 HA A:CYS52 4.3 0.0 1.0 HB3 A:CYS52 4.3 0.0 1.0 HG3 A:GLN42 4.5 0.0 1.0 H A:CYS86 4.5 0.0 1.0 CA A:CYS52 4.5 0.0 1.0 N A:CYS47 4.6 0.0 1.0 OD1 A:ASN49 4.6 0.0 1.0 H A:SER59 4.6 0.0 1.0 CA A:CYS47 4.7 0.0 1.0 H A:CYS47 4.7 0.0 1.0 HG2 A:GLN42 4.7 0.0 1.0 CD A:GLN42 4.8 0.0 1.0 CA A:CYS86 4.9 0.0 1.0 C A:GLY46 4.9 0.0 1.0 CA A:CYS57 4.9 0.0 1.0 CB A:SER59 4.9 0.0 1.0 CG A:GLN42 4.9 0.0 1.0 CB A:ASN49 5.0 0.0 1.0 HA2 A:GLY46 5.0 0.0 1.0 H A:ASP87 5.0 0.0 1.0

T.A.Bregnard, D.Fairchild, X.Chen, H.Erlandsen, K.J.Walters, D.M.Korzhnev, I.Bezsonova. Differences in Structure, Dynamics and Zn-Coordination Between Isoforms of Human Ubiquitin Ligase UBE3A To Be Published.