Zinc in PDB 8e1d: uc(Nmr)-Derived Ensemble of the TAZ2 Domain of P300 Bound to the Microphthalmia-Associated Transcription Factor

Enzymatic activity of uc(Nmr)-Derived Ensemble of the TAZ2 Domain of P300 Bound to the Microphthalmia-Associated Transcription Factor

All present enzymatic activity of uc(Nmr)-Derived Ensemble of the TAZ2 Domain of P300 Bound to the Microphthalmia-Associated Transcription Factor:
2.3.1.48;

Zinc Binding Sites:

The binding sites of Zinc atom in the uc(Nmr)-Derived Ensemble of the TAZ2 Domain of P300 Bound to the Microphthalmia-Associated Transcription Factor (pdb code 8e1d). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the uc(Nmr)-Derived Ensemble of the TAZ2 Domain of P300 Bound to the Microphthalmia-Associated Transcription Factor, PDB code: 8e1d:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in 8e1d

Go back to Zinc Binding Sites List in 8e1d
Zinc binding site 1 out of 3 in the uc(Nmr)-Derived Ensemble of the TAZ2 Domain of P300 Bound to the Microphthalmia-Associated Transcription Factor


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr)-Derived Ensemble of the TAZ2 Domain of P300 Bound to the Microphthalmia-Associated Transcription Factor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1901

b:0.0
occ:1.00
NE2 A:HIS1744 2.0 0.0 1.0
SG A:CYS1758 2.3 0.0 1.0
SG A:CYS1753 2.3 0.0 1.0
SG A:CYS1748 2.3 0.0 1.0
CE1 A:HIS1744 2.6 0.0 1.0
HE1 A:HIS1744 2.8 0.0 1.0
CD2 A:HIS1744 2.9 0.0 1.0
HB2 A:CYS1748 3.2 0.0 1.0
HB3 A:CYS1758 3.3 0.0 1.0
CB A:CYS1758 3.3 0.0 1.0
CB A:CYS1748 3.3 0.0 1.0
HB2 A:CYS1753 3.3 0.0 1.0
HD2 A:HIS1744 3.3 0.0 1.0
CB A:CYS1753 3.4 0.0 1.0
HB2 A:CYS1758 3.4 0.0 1.0
ND1 A:HIS1744 3.5 0.0 1.0
HB3 A:CYS1748 3.6 0.0 1.0
HB3 A:CYS1753 3.6 0.0 1.0
HG A:LEU1755 3.7 0.0 1.0
CG A:HIS1744 3.7 0.0 1.0
HA A:ALA1745 4.1 0.0 1.0
HD12 A:LEU1755 4.3 0.0 1.0
HD1 A:HIS1744 4.3 0.0 1.0
HB3 A:ASN1750 4.4 0.0 1.0
CG A:LEU1755 4.7 0.0 1.0
CA A:CYS1748 4.7 0.0 1.0
CA A:CYS1758 4.8 0.0 1.0
CA A:CYS1753 4.8 0.0 1.0
HB3 A:LEU1755 4.8 0.0 1.0
CD1 A:LEU1755 4.9 0.0 1.0
O A:HIS1744 4.9 0.0 1.0
HA A:CYS1748 4.9 0.0 1.0
HA A:CYS1753 4.9 0.0 1.0
HD13 A:LEU1755 5.0 0.0 1.0
H A:LEU1755 5.0 0.0 1.0
C A:HIS1744 5.0 0.0 1.0
CB A:HIS1744 5.0 0.0 1.0

Zinc binding site 2 out of 3 in 8e1d

Go back to Zinc Binding Sites List in 8e1d
Zinc binding site 2 out of 3 in the uc(Nmr)-Derived Ensemble of the TAZ2 Domain of P300 Bound to the Microphthalmia-Associated Transcription Factor


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of uc(Nmr)-Derived Ensemble of the TAZ2 Domain of P300 Bound to the Microphthalmia-Associated Transcription Factor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1902

b:0.0
occ:1.00
NE2 A:HIS1767 2.0 0.0 1.0
SG A:CYS1771 2.3 0.0 1.0
SG A:CYS1779 2.3 0.0 1.0
SG A:CYS1782 2.3 0.0 1.0
CE1 A:HIS1767 2.5 0.0 1.0
HE1 A:HIS1767 2.8 0.0 1.0
CD2 A:HIS1767 2.9 0.0 1.0
HB3 A:CYS1779 3.1 0.0 1.0
HB3 A:CYS1771 3.1 0.0 1.0
HB2 A:CYS1782 3.3 0.0 1.0
HA A:THR1768 3.3 0.0 1.0
H A:CYS1782 3.3 0.0 1.0
CB A:CYS1771 3.3 0.0 1.0
CB A:CYS1779 3.3 0.0 1.0
HD2 A:HIS1767 3.4 0.0 1.0
HG22 A:THR1768 3.4 0.0 1.0
HB2 A:LYS1774 3.4 0.0 1.0
CB A:CYS1782 3.4 0.0 1.0
ND1 A:HIS1767 3.5 0.0 1.0
CG A:HIS1767 3.7 0.0 1.0
HB2 A:CYS1771 3.7 0.0 1.0
HB2 A:CYS1779 3.9 0.0 1.0
HB A:ILE1781 3.9 0.0 1.0
N A:CYS1782 4.0 0.0 1.0
CA A:CYS1782 4.2 0.0 1.0
HB3 A:CYS1782 4.3 0.0 1.0
CA A:THR1768 4.3 0.0 1.0
HD1 A:HIS1767 4.3 0.0 1.0
CG2 A:THR1768 4.3 0.0 1.0
HA A:CYS1779 4.4 0.0 1.0
CB A:LYS1774 4.4 0.0 1.0
HA A:CYS1782 4.5 0.0 1.0
CA A:CYS1779 4.5 0.0 1.0
O A:HIS1767 4.6 0.0 1.0
HB3 A:LYS1774 4.6 0.0 1.0
HA A:CYS1771 4.6 0.0 1.0
CA A:CYS1771 4.6 0.0 1.0
HG21 A:THR1768 4.6 0.0 1.0
N A:THR1768 4.6 0.0 1.0
C A:HIS1767 4.7 0.0 1.0
CB A:THR1768 4.8 0.0 1.0
HB A:THR1768 4.8 0.0 1.0
HD3 A:LYS1774 4.8 0.0 1.0
H A:LYS1774 4.9 0.0 1.0
HZ A:PHE1805 4.9 0.0 1.0
CB A:ILE1781 5.0 0.0 1.0

Zinc binding site 3 out of 3 in 8e1d

Go back to Zinc Binding Sites List in 8e1d
Zinc binding site 3 out of 3 in the uc(Nmr)-Derived Ensemble of the TAZ2 Domain of P300 Bound to the Microphthalmia-Associated Transcription Factor


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of uc(Nmr)-Derived Ensemble of the TAZ2 Domain of P300 Bound to the Microphthalmia-Associated Transcription Factor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1903

b:0.0
occ:1.00
NE2 A:HIS1792 2.0 0.0 1.0
SG A:CYS1806 2.3 0.0 1.0
SG A:CYS1801 2.3 0.0 1.0
SG A:CYS1796 2.3 0.0 1.0
CE1 A:HIS1792 2.5 0.0 1.0
HE1 A:HIS1792 2.7 0.0 1.0
CD2 A:HIS1792 2.9 0.0 1.0
HB3 A:CYS1801 3.2 0.0 1.0
HB3 A:CYS1796 3.3 0.0 1.0
HB2 A:CYS1806 3.3 0.0 1.0
CB A:CYS1801 3.3 0.0 1.0
CB A:CYS1806 3.4 0.0 1.0
CB A:CYS1796 3.4 0.0 1.0
HD2 A:HIS1792 3.4 0.0 1.0
ND1 A:HIS1792 3.5 0.0 1.0
HA A:ALA1793 3.5 0.0 1.0
HB3 A:CYS1806 3.6 0.0 1.0
HB2 A:CYS1801 3.6 0.0 1.0
HB2 A:CYS1796 3.7 0.0 1.0
CG A:HIS1792 3.7 0.0 1.0
HD2 A:PRO1802 4.0 0.0 1.0
HB3 A:ALA1793 4.2 0.0 1.0
HD1 A:HIS1792 4.2 0.0 1.0
CA A:ALA1793 4.4 0.0 1.0
O A:HIS1792 4.5 0.0 1.0
N A:ALA1793 4.6 0.0 1.0
HG21 A:VAL1803 4.6 0.0 1.0
C A:HIS1792 4.6 0.0 1.0
CB A:ALA1793 4.7 0.0 1.0
CA A:CYS1801 4.7 0.0 1.0
CA A:CYS1796 4.8 0.0 1.0
CA A:CYS1806 4.8 0.0 1.0
HD3 A:PRO1802 4.8 0.0 1.0
CD A:PRO1802 4.8 0.0 1.0
HA A:CYS1796 4.9 0.0 1.0
HA A:CYS1801 4.9 0.0 1.0
HB1 A:ALA1793 4.9 0.0 1.0
HA A:CYS1806 5.0 0.0 1.0

Reference:

A.D.Brown, K.L.Vergunst, M.Branch, C.M.Blair, D.J.Dupre, G.S.Ballie, D.N.Langelaan. Structural Basis of Cbp/P300 Recruitment By the Microphthalmia-Associated Transcription Factor To Be Published.
Page generated: Wed Oct 30 19:24:28 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy