Zinc in PDB 8e14: Cryo-Em Structure of Rous Sarcoma Virus Strand Transfer Complex

All present enzymatic activity of Cryo-Em Structure of Rous Sarcoma Virus Strand Transfer Complex:
2.7.7.49; 2.7.7.7; 3.1.26.4;

The binding sites of Zinc atom in the Cryo-Em Structure of Rous Sarcoma Virus Strand Transfer Complex (pdb code 8e14). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Cryo-Em Structure of Rous Sarcoma Virus Strand Transfer Complex, PDB code: 8e14:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Cryo-Em Structure of Rous Sarcoma Virus Strand Transfer Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Rous Sarcoma Virus Strand Transfer Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn301 b:249.1 occ:1.00 ND1 A:HIS13 2.0 172.5 1.0 NE2 A:HIS9 2.0 175.6 1.0 CB A:CYS37 2.2 211.1 1.0 SG A:CYS37 2.3 209.2 1.0 SG A:CYS40 2.3 195.8 1.0 CE1 A:HIS13 2.7 171.5 1.0 CE1 A:HIS9 2.7 173.5 1.0 CD2 A:HIS9 3.1 175.3 1.0 CG A:HIS13 3.3 170.0 1.0 CA A:CYS37 3.7 209.8 1.0 ND1 A:HIS9 3.8 171.8 1.0 NE2 A:HIS13 3.9 169.5 1.0 CB A:CYS40 3.9 195.5 1.0 CB A:HIS13 3.9 168.9 1.0 CG A:HIS9 4.0 172.8 1.0 O A:CYS37 4.1 210.7 1.0 CD2 A:HIS13 4.2 169.7 1.0 C A:CYS37 4.3 209.9 1.0 N A:CYS37 4.4 210.1 1.0 N A:CYS40 4.4 194.8 1.0 ND1 A:HIS39 4.7 198.7 1.0 CA A:CYS40 4.8 195.0 1.0 O A:HIS9 4.9 171.9 1.0 CA A:HIS13 5.0 168.5 1.0

Zinc binding site 2 out of 2 in the Cryo-Em Structure of Rous Sarcoma Virus Strand Transfer Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Cryo-Em Structure of Rous Sarcoma Virus Strand Transfer Complex within 5.0Å range: probe atom residue distance (Å) B Occ E:Zn301 b:236.7 occ:1.00 NE2 E:HIS9 2.0 167.8 1.0 ND1 E:HIS13 2.0 170.6 1.0 CE1 E:HIS9 2.2 168.1 1.0 SG E:CYS40 2.3 210.7 1.0 SG E:CYS37 2.3 207.2 1.0 CB E:CYS40 2.7 207.0 1.0 CE1 E:HIS13 3.0 169.2 1.0 CG E:HIS13 3.1 168.7 1.0 CD2 E:HIS9 3.2 165.6 1.0 ND1 E:HIS9 3.3 165.1 1.0 CB E:HIS13 3.4 167.3 1.0 CG E:HIS9 3.9 164.5 1.0 CB E:CYS37 4.0 205.2 1.0 CA E:HIS13 4.1 166.7 1.0 CA E:CYS40 4.1 207.0 1.0 NE2 E:HIS13 4.1 168.2 1.0 CD2 E:HIS13 4.2 168.4 1.0 N E:CYS40 4.3 206.9 1.0 O E:HIS9 4.7 165.3 1.0 O E:CYS37 4.8 205.7 1.0

K.K.Pandey, S.Bera, K.Shi, H.Aihara, D.P.Grandgenett. Cryo-Em Structure of Rous Sarcoma Virus Strand Transfer Complex To Be Published.