Zinc in PDB 7wtu: Cryo-Em Structure of A Human Pre-40S Ribosomal Subunit - State RRP12- A1 (Without CK1)

The binding sites of Zinc atom in the Cryo-Em Structure of A Human Pre-40S Ribosomal Subunit - State RRP12- A1 (Without CK1) (pdb code 7wtu). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of A Human Pre-40S Ribosomal Subunit - State RRP12- A1 (Without CK1), PDB code: 7wtu:

Zinc binding site 1 out of 1 in the Cryo-Em Structure of A Human Pre-40S Ribosomal Subunit - State RRP12- A1 (Without CK1)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of A Human Pre-40S Ribosomal Subunit - State RRP12- A1 (Without CK1) within 5.0Å range: probe atom residue distance (Å) B Occ f:Zn500 b:24.8 occ:1.00 CB f:CYS126 2.0 19.3 1.0 SG f:CYS121 2.3 18.5 1.0 SG f:CYS126 2.3 19.3 1.0 SG f:CYS141 2.3 21.5 1.0 CG1 f:VAL130 3.4 20.4 1.0 CB f:CYS121 3.5 18.5 1.0 CA f:CYS126 3.6 19.3 1.0 OG f:SER123 3.8 17.4 1.0 CB f:CYS141 3.9 21.5 1.0 SG f:CYS144 4.0 20.8 1.0 CB f:VAL130 4.1 20.4 1.0 C f:CYS126 4.2 19.3 1.0 CD1 f:LEU146 4.4 19.8 1.0 N f:CYS126 4.4 19.3 1.0 CB f:LYS143 4.5 21.0 1.0 CG2 f:VAL130 4.5 20.4 1.0 O f:CYS126 4.6 19.3 1.0 N f:CYS144 4.8 20.8 1.0 N f:GLY127 4.8 18.0 1.0 CA f:CYS121 4.9 18.5 1.0

J.Cheng, B.Lau, M.Thoms, M.Ameismeier, O.Berninghausen, E.Hurt, R.Beckmann. The Nucleoplasmic Phase of Pre-40S Formation Prior to Nuclear Export. Nucleic Acids Res. V. 50 11924 2022.
ISSN: ESSN 1362-4962
PubMed: 36321656
DOI: 10.1093/NAR/GKAC961