Zinc in PDB 7w1m: Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex
Other elements in 7w1m:
The structure of Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex also contains other interesting chemical elements:
Zinc Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
11;
Binding sites:
The binding sites of Zinc atom in the Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex
(pdb code 7w1m). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 11 binding sites of Zinc where determined in the
Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex, PDB code: 7w1m:
Jump to Zinc binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Zinc binding site 1 out
of 11 in 7w1m
Go back to
Zinc Binding Sites List in 7w1m
Zinc binding site 1 out
of 11 in the Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Zn801
b:455.8
occ:1.00
|
NE2
|
H:HIS284
|
2.0
|
374.6
|
1.0
|
|
NE2
|
H:HIS288
|
2.0
|
400.0
|
1.0
|
|
SG
|
H:CYS271
|
2.3
|
471.9
|
1.0
|
|
SG
|
H:CYS268
|
2.3
|
415.2
|
1.0
|
|
CE1
|
H:HIS284
|
2.7
|
374.6
|
1.0
|
|
CD2
|
H:HIS288
|
2.8
|
400.0
|
1.0
|
|
CE1
|
H:HIS288
|
2.9
|
400.0
|
1.0
|
|
CD2
|
H:HIS284
|
3.1
|
374.6
|
1.0
|
|
N
|
H:CYS271
|
3.4
|
471.9
|
1.0
|
|
CB
|
H:CYS271
|
3.5
|
471.9
|
1.0
|
|
CB
|
H:LEU270
|
3.6
|
459.9
|
1.0
|
|
CB
|
H:CYS268
|
3.7
|
415.2
|
1.0
|
|
CG
|
H:HIS288
|
3.9
|
400.0
|
1.0
|
|
C
|
H:LEU270
|
3.9
|
459.9
|
1.0
|
|
ND1
|
H:HIS288
|
3.9
|
400.0
|
1.0
|
|
ND1
|
H:HIS284
|
3.9
|
374.6
|
1.0
|
|
CA
|
H:CYS271
|
3.9
|
471.9
|
1.0
|
|
CA
|
H:LEU270
|
4.1
|
459.9
|
1.0
|
|
CG
|
H:HIS284
|
4.1
|
374.6
|
1.0
|
|
N
|
H:LEU270
|
4.1
|
459.9
|
1.0
|
|
CB
|
H:TYR273
|
4.4
|
369.6
|
1.0
|
|
C
|
H:CYS271
|
4.5
|
471.9
|
1.0
|
|
O
|
H:CYS271
|
4.5
|
471.9
|
1.0
|
|
CE
|
H:MET285
|
4.6
|
358.4
|
1.0
|
|
O
|
H:LEU270
|
4.7
|
459.9
|
1.0
|
|
CG
|
H:LEU270
|
4.8
|
459.9
|
1.0
|
|
CA
|
H:CYS268
|
5.0
|
415.2
|
1.0
|
|
Zinc binding site 2 out
of 11 in 7w1m
Go back to
Zinc Binding Sites List in 7w1m
Zinc binding site 2 out
of 11 in the Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Zn802
b:431.8
occ:1.00
|
NE2
|
H:HIS312
|
2.0
|
367.2
|
1.0
|
|
NE2
|
H:HIS316
|
2.0
|
367.9
|
1.0
|
|
SG
|
H:CYS299
|
2.3
|
389.4
|
1.0
|
|
SG
|
H:CYS296
|
2.3
|
371.3
|
1.0
|
|
CD2
|
H:HIS316
|
2.6
|
367.9
|
1.0
|
|
CD2
|
H:HIS312
|
2.9
|
367.2
|
1.0
|
|
CE1
|
H:HIS312
|
3.0
|
367.2
|
1.0
|
|
CE1
|
H:HIS316
|
3.0
|
367.9
|
1.0
|
|
CB
|
H:CYS296
|
3.4
|
371.3
|
1.0
|
|
CB
|
H:CYS299
|
3.6
|
389.4
|
1.0
|
|
N
|
H:CYS299
|
3.6
|
389.4
|
1.0
|
|
CG
|
H:HIS316
|
3.7
|
367.9
|
1.0
|
|
ND1
|
H:HIS316
|
3.9
|
367.9
|
1.0
|
|
CG
|
H:HIS312
|
4.0
|
367.2
|
1.0
|
|
ND1
|
H:HIS312
|
4.0
|
367.2
|
1.0
|
|
CB
|
H:LEU298
|
4.0
|
376.7
|
1.0
|
|
CA
|
H:CYS299
|
4.1
|
389.4
|
1.0
|
|
C
|
H:LEU298
|
4.4
|
376.7
|
1.0
|
|
O
|
H:CYS299
|
4.5
|
389.4
|
1.0
|
|
CA
|
H:LEU298
|
4.6
|
376.7
|
1.0
|
|
C
|
H:CYS299
|
4.7
|
389.4
|
1.0
|
|
N
|
H:LEU298
|
4.7
|
376.7
|
1.0
|
|
CA
|
H:CYS296
|
4.8
|
371.3
|
1.0
|
|
CD1
|
H:LEU298
|
4.8
|
376.7
|
1.0
|
|
CG
|
H:LEU298
|
4.8
|
376.7
|
1.0
|
|
Zinc binding site 3 out
of 11 in 7w1m
Go back to
Zinc Binding Sites List in 7w1m
Zinc binding site 3 out
of 11 in the Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Zn803
b:408.1
occ:1.00
|
NE2
|
H:HIS340
|
2.1
|
329.1
|
1.0
|
|
NE2
|
H:HIS345
|
2.1
|
322.3
|
1.0
|
|
SG
|
H:CYS324
|
2.3
|
345.0
|
1.0
|
|
SG
|
H:CYS327
|
2.3
|
403.8
|
1.0
|
|
CE1
|
H:HIS345
|
2.9
|
322.3
|
1.0
|
|
CD2
|
H:HIS340
|
3.0
|
329.1
|
1.0
|
|
CE1
|
H:HIS340
|
3.1
|
329.1
|
1.0
|
|
CB
|
H:CYS327
|
3.2
|
403.8
|
1.0
|
|
CD2
|
H:HIS345
|
3.2
|
322.3
|
1.0
|
|
CB
|
H:CYS324
|
3.5
|
345.0
|
1.0
|
|
N
|
H:CYS327
|
3.6
|
403.8
|
1.0
|
|
CA
|
H:CYS327
|
4.0
|
403.8
|
1.0
|
|
ND1
|
H:HIS345
|
4.1
|
322.3
|
1.0
|
|
CG
|
H:HIS340
|
4.2
|
329.1
|
1.0
|
|
ND1
|
H:HIS340
|
4.2
|
329.1
|
1.0
|
|
C
|
H:ASP326
|
4.2
|
370.3
|
1.0
|
|
CG
|
H:HIS345
|
4.3
|
322.3
|
1.0
|
|
CB
|
H:ASP326
|
4.5
|
370.3
|
1.0
|
|
C
|
H:CYS327
|
4.7
|
403.8
|
1.0
|
|
CA
|
H:ASP326
|
4.7
|
370.3
|
1.0
|
|
N
|
H:ASP326
|
4.7
|
370.3
|
1.0
|
|
CG
|
H:MET329
|
4.8
|
335.7
|
1.0
|
|
CA
|
H:CYS324
|
4.9
|
345.0
|
1.0
|
|
O
|
H:ASP326
|
4.9
|
370.3
|
1.0
|
|
Zinc binding site 4 out
of 11 in 7w1m
Go back to
Zinc Binding Sites List in 7w1m
Zinc binding site 4 out
of 11 in the Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Zn804
b:376.2
occ:1.00
|
NE2
|
H:HIS373
|
2.0
|
339.5
|
1.0
|
|
NE2
|
H:HIS369
|
2.0
|
317.7
|
1.0
|
|
SG
|
H:CYS353
|
2.3
|
315.5
|
1.0
|
|
SG
|
H:CYS356
|
2.3
|
345.4
|
1.0
|
|
CD2
|
H:HIS373
|
2.7
|
339.5
|
1.0
|
|
CE1
|
H:HIS369
|
3.0
|
317.7
|
1.0
|
|
CD2
|
H:HIS369
|
3.1
|
317.7
|
1.0
|
|
CE1
|
H:HIS373
|
3.2
|
339.5
|
1.0
|
|
CB
|
H:CYS353
|
3.4
|
315.5
|
1.0
|
|
N
|
H:CYS356
|
3.5
|
345.4
|
1.0
|
|
CB
|
H:CYS356
|
3.7
|
345.4
|
1.0
|
|
CG
|
H:HIS373
|
4.0
|
339.5
|
1.0
|
|
N
|
H:MET355
|
4.0
|
336.4
|
1.0
|
|
ND1
|
H:HIS369
|
4.1
|
317.7
|
1.0
|
|
CA
|
H:CYS356
|
4.1
|
345.4
|
1.0
|
|
ND1
|
H:HIS373
|
4.2
|
339.5
|
1.0
|
|
CG
|
H:HIS369
|
4.2
|
317.7
|
1.0
|
|
N
|
H:SER354
|
4.2
|
329.6
|
1.0
|
|
OG
|
H:SER354
|
4.5
|
329.6
|
1.0
|
|
C
|
H:MET355
|
4.5
|
336.4
|
1.0
|
|
CA
|
H:MET355
|
4.6
|
336.4
|
1.0
|
|
CB
|
H:MET355
|
4.6
|
336.4
|
1.0
|
|
CA
|
H:CYS353
|
4.6
|
315.5
|
1.0
|
|
O
|
H:CYS356
|
4.7
|
345.4
|
1.0
|
|
C
|
H:CYS356
|
4.7
|
345.4
|
1.0
|
|
C
|
H:CYS353
|
4.9
|
315.5
|
1.0
|
|
CD1
|
H:ILE370
|
4.9
|
295.2
|
1.0
|
|
C
|
H:SER354
|
5.0
|
329.6
|
1.0
|
|
Zinc binding site 5 out
of 11 in 7w1m
Go back to
Zinc Binding Sites List in 7w1m
Zinc binding site 5 out
of 11 in the Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 5 of Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Zn805
b:437.1
occ:1.00
|
NE2
|
H:HIS401
|
2.0
|
364.3
|
1.0
|
|
NE2
|
H:HIS397
|
2.0
|
340.8
|
1.0
|
|
SG
|
H:CYS381
|
2.3
|
378.0
|
1.0
|
|
SG
|
H:CYS384
|
2.3
|
384.9
|
1.0
|
|
CE1
|
H:HIS397
|
2.7
|
340.8
|
1.0
|
|
CD2
|
H:HIS401
|
2.8
|
364.3
|
1.0
|
|
CB
|
H:CYS384
|
3.0
|
384.9
|
1.0
|
|
CE1
|
H:HIS401
|
3.1
|
364.3
|
1.0
|
|
CD2
|
H:HIS397
|
3.2
|
340.8
|
1.0
|
|
N
|
H:CYS384
|
3.4
|
384.9
|
1.0
|
|
CB
|
H:CYS381
|
3.6
|
378.0
|
1.0
|
|
CA
|
H:CYS384
|
3.7
|
384.9
|
1.0
|
|
C
|
H:LEU383
|
3.9
|
375.0
|
1.0
|
|
CG
|
H:HIS401
|
3.9
|
364.3
|
1.0
|
|
ND1
|
H:HIS397
|
4.0
|
340.8
|
1.0
|
|
ND1
|
H:HIS401
|
4.0
|
364.3
|
1.0
|
|
CG
|
H:HIS397
|
4.2
|
340.8
|
1.0
|
|
CB
|
H:LEU383
|
4.3
|
375.0
|
1.0
|
|
C
|
H:CYS384
|
4.5
|
384.9
|
1.0
|
|
CA
|
H:LEU383
|
4.5
|
375.0
|
1.0
|
|
O
|
H:LEU383
|
4.5
|
375.0
|
1.0
|
|
N
|
H:LEU383
|
4.6
|
375.0
|
1.0
|
|
CB
|
H:TYR386
|
4.8
|
339.6
|
1.0
|
|
CA
|
H:CYS381
|
4.9
|
378.0
|
1.0
|
|
O
|
H:CYS384
|
4.9
|
384.9
|
1.0
|
|
O
|
H:CYS381
|
4.9
|
378.0
|
1.0
|
|
Zinc binding site 6 out
of 11 in 7w1m
Go back to
Zinc Binding Sites List in 7w1m
Zinc binding site 6 out
of 11 in the Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 6 of Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Zn806
b:388.9
occ:1.00
|
NE2
|
H:HIS430
|
2.1
|
357.8
|
1.0
|
|
NE2
|
H:HIS425
|
2.1
|
355.8
|
1.0
|
|
CD2
|
H:HIS425
|
2.3
|
355.8
|
1.0
|
|
SG
|
H:CYS412
|
2.3
|
410.2
|
1.0
|
|
SG
|
H:CYS409
|
2.3
|
409.5
|
1.0
|
|
CD2
|
H:HIS430
|
2.6
|
357.8
|
1.0
|
|
CE1
|
H:HIS430
|
3.3
|
357.8
|
1.0
|
|
CE1
|
H:HIS425
|
3.4
|
355.8
|
1.0
|
|
CG
|
H:HIS425
|
3.6
|
355.8
|
1.0
|
|
CB
|
H:CYS409
|
3.7
|
409.5
|
1.0
|
|
CB
|
H:CYS412
|
3.7
|
410.2
|
1.0
|
|
CG
|
H:HIS430
|
3.9
|
357.8
|
1.0
|
|
N
|
H:CYS412
|
3.9
|
410.2
|
1.0
|
|
ND1
|
H:HIS425
|
4.1
|
355.8
|
1.0
|
|
ND1
|
H:HIS430
|
4.2
|
357.8
|
1.0
|
|
CA
|
H:CYS412
|
4.4
|
410.2
|
1.0
|
|
CG1
|
H:ILE426
|
4.7
|
340.6
|
1.0
|
|
CB
|
H:ILE411
|
4.8
|
435.2
|
1.0
|
|
CB
|
H:HIS425
|
4.8
|
355.8
|
1.0
|
|
O
|
H:HIS425
|
4.9
|
355.8
|
1.0
|
|
N
|
H:ILE426
|
5.0
|
340.6
|
1.0
|
|
C
|
H:HIS425
|
5.0
|
355.8
|
1.0
|
|
Zinc binding site 7 out
of 11 in 7w1m
Go back to
Zinc Binding Sites List in 7w1m
Zinc binding site 7 out
of 11 in the Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 7 of Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Zn807
b:466.6
occ:1.00
|
CE1
|
H:HIS455
|
1.9
|
367.3
|
1.0
|
|
NE2
|
H:HIS460
|
2.1
|
355.1
|
1.0
|
|
NE2
|
H:HIS455
|
2.1
|
367.3
|
1.0
|
|
SG
|
H:CYS442
|
2.3
|
430.5
|
1.0
|
|
SG
|
H:CYS439
|
2.3
|
406.6
|
1.0
|
|
CD2
|
H:HIS460
|
3.0
|
355.1
|
1.0
|
|
CE1
|
H:HIS460
|
3.1
|
355.1
|
1.0
|
|
ND1
|
H:HIS455
|
3.1
|
367.3
|
1.0
|
|
CB
|
H:CYS439
|
3.3
|
406.6
|
1.0
|
|
CD2
|
H:HIS455
|
3.3
|
367.3
|
1.0
|
|
CB
|
H:CYS442
|
3.3
|
430.5
|
1.0
|
|
N
|
H:CYS442
|
3.7
|
430.5
|
1.0
|
|
CG
|
H:HIS455
|
3.8
|
367.3
|
1.0
|
|
CA
|
H:CYS442
|
4.1
|
430.5
|
1.0
|
|
ND1
|
H:HIS460
|
4.1
|
355.1
|
1.0
|
|
CG
|
H:HIS460
|
4.1
|
355.1
|
1.0
|
|
CA
|
H:CYS439
|
4.7
|
406.6
|
1.0
|
|
C
|
H:CYS442
|
4.7
|
430.5
|
1.0
|
|
OG1
|
H:THR444
|
4.8
|
401.8
|
1.0
|
|
C
|
H:HIS441
|
4.8
|
406.9
|
1.0
|
|
CB
|
H:HIS441
|
4.8
|
406.9
|
1.0
|
|
O
|
H:CYS442
|
4.9
|
430.5
|
1.0
|
|
Zinc binding site 8 out
of 11 in 7w1m
Go back to
Zinc Binding Sites List in 7w1m
Zinc binding site 8 out
of 11 in the Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 8 of Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Zn808
b:456.4
occ:1.00
|
NE2
|
H:HIS485
|
2.1
|
395.3
|
1.0
|
|
NE2
|
H:HIS489
|
2.1
|
377.5
|
1.0
|
|
SG
|
H:CYS469
|
2.3
|
404.0
|
1.0
|
|
SG
|
H:CYS472
|
2.3
|
418.4
|
1.0
|
|
CE1
|
H:HIS485
|
2.7
|
395.3
|
1.0
|
|
CD2
|
H:HIS489
|
2.9
|
377.5
|
1.0
|
|
CB
|
H:CYS472
|
3.0
|
418.4
|
1.0
|
|
CE1
|
H:HIS489
|
3.2
|
377.5
|
1.0
|
|
CD2
|
H:HIS485
|
3.2
|
395.3
|
1.0
|
|
N
|
H:CYS472
|
3.4
|
418.4
|
1.0
|
|
CB
|
H:CYS469
|
3.4
|
404.0
|
1.0
|
|
CA
|
H:CYS472
|
3.8
|
418.4
|
1.0
|
|
ND1
|
H:HIS485
|
3.9
|
395.3
|
1.0
|
|
C
|
H:TYR471
|
4.0
|
386.1
|
1.0
|
|
CG
|
H:HIS489
|
4.1
|
377.5
|
1.0
|
|
ND1
|
H:HIS489
|
4.2
|
377.5
|
1.0
|
|
CG
|
H:HIS485
|
4.2
|
395.3
|
1.0
|
|
CB
|
H:TYR471
|
4.2
|
386.1
|
1.0
|
|
N
|
H:TYR471
|
4.4
|
386.1
|
1.0
|
|
CA
|
H:TYR471
|
4.4
|
386.1
|
1.0
|
|
C
|
H:CYS472
|
4.6
|
418.4
|
1.0
|
|
CD1
|
H:TYR471
|
4.6
|
386.1
|
1.0
|
|
O
|
H:TYR471
|
4.7
|
386.1
|
1.0
|
|
CA
|
H:CYS469
|
4.8
|
404.0
|
1.0
|
|
O
|
H:CYS472
|
4.9
|
418.4
|
1.0
|
|
CG
|
H:TYR471
|
4.9
|
386.1
|
1.0
|
|
Zinc binding site 9 out
of 11 in 7w1m
Go back to
Zinc Binding Sites List in 7w1m
Zinc binding site 9 out
of 11 in the Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 9 of Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Zn809
b:496.9
occ:1.00
|
NE2
|
H:HIS513
|
2.0
|
457.2
|
1.0
|
|
NE2
|
H:HIS517
|
2.0
|
468.1
|
1.0
|
|
SG
|
H:CYS500
|
2.3
|
502.5
|
1.0
|
|
SG
|
H:CYS497
|
2.3
|
465.7
|
1.0
|
|
CD2
|
H:HIS517
|
2.6
|
468.1
|
1.0
|
|
CE1
|
H:HIS513
|
2.9
|
457.2
|
1.0
|
|
CD2
|
H:HIS513
|
3.0
|
457.2
|
1.0
|
|
CE1
|
H:HIS517
|
3.2
|
468.1
|
1.0
|
|
CB
|
H:CYS500
|
3.5
|
502.5
|
1.0
|
|
N
|
H:CYS500
|
3.5
|
502.5
|
1.0
|
|
CB
|
H:CYS497
|
3.7
|
465.7
|
1.0
|
|
CG
|
H:HIS517
|
3.8
|
468.1
|
1.0
|
|
OE1
|
H:GLN499
|
3.9
|
499.8
|
1.0
|
|
CA
|
H:CYS500
|
4.0
|
502.5
|
1.0
|
|
ND1
|
H:HIS513
|
4.0
|
457.2
|
1.0
|
|
ND1
|
H:HIS517
|
4.1
|
468.1
|
1.0
|
|
CG
|
H:HIS513
|
4.1
|
457.2
|
1.0
|
|
CB
|
H:GLN499
|
4.1
|
499.8
|
1.0
|
|
O
|
H:CYS500
|
4.2
|
502.5
|
1.0
|
|
C
|
H:GLN499
|
4.4
|
499.8
|
1.0
|
|
C
|
H:CYS500
|
4.4
|
502.5
|
1.0
|
|
N
|
H:GLN499
|
4.5
|
499.8
|
1.0
|
|
CA
|
H:GLN499
|
4.6
|
499.8
|
1.0
|
|
OP2
|
G:DG12
|
4.7
|
563.2
|
1.0
|
|
CD
|
H:GLN499
|
4.9
|
499.8
|
1.0
|
|
CA
|
H:CYS497
|
5.0
|
465.7
|
1.0
|
|
Zinc binding site 10 out
of 11 in 7w1m
Go back to
Zinc Binding Sites List in 7w1m
Zinc binding site 10 out
of 11 in the Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 10 of Cryo-Em Structure of Human Cohesin-Ctcf-Dna Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Zn810
b:457.9
occ:1.00
|
SG
|
H:CYS525
|
1.9
|
433.8
|
1.0
|
|
NE2
|
H:HIS541
|
2.1
|
441.4
|
1.0
|
|
NE2
|
H:HIS546
|
2.2
|
448.5
|
1.0
|
|
SG
|
H:CYS528
|
2.7
|
438.1
|
1.0
|
|
CD2
|
H:HIS546
|
2.9
|
448.5
|
1.0
|
|
CD2
|
H:HIS541
|
3.0
|
441.4
|
1.0
|
|
CE1
|
H:HIS541
|
3.2
|
441.4
|
1.0
|
|
CB
|
H:CYS525
|
3.2
|
433.8
|
1.0
|
|
CE1
|
H:HIS546
|
3.4
|
448.5
|
1.0
|
|
CB
|
H:CYS528
|
3.6
|
438.1
|
1.0
|
|
N
|
H:CYS528
|
3.9
|
438.1
|
1.0
|
|
CB
|
H:TYR545
|
4.1
|
435.3
|
1.0
|
|
CG
|
H:HIS541
|
4.2
|
441.4
|
1.0
|
|
CG
|
H:HIS546
|
4.2
|
448.5
|
1.0
|
|
CA
|
H:PHE542
|
4.2
|
412.9
|
1.0
|
|
ND1
|
H:HIS541
|
4.2
|
441.4
|
1.0
|
|
CA
|
H:CYS528
|
4.4
|
438.1
|
1.0
|
|
ND1
|
H:HIS546
|
4.4
|
448.5
|
1.0
|
|
CB
|
H:HIS527
|
4.5
|
450.9
|
1.0
|
|
C
|
H:HIS527
|
4.5
|
450.9
|
1.0
|
|
N
|
H:HIS527
|
4.6
|
450.9
|
1.0
|
|
CA
|
H:CYS525
|
4.6
|
433.8
|
1.0
|
|
O
|
H:PHE542
|
4.6
|
412.9
|
1.0
|
|
CA
|
H:HIS527
|
4.7
|
450.9
|
1.0
|
|
N
|
H:PHE542
|
4.8
|
412.9
|
1.0
|
|
CG
|
H:TYR545
|
4.9
|
435.3
|
1.0
|
|
C
|
H:PHE542
|
5.0
|
412.9
|
1.0
|
|
Reference:
H.Zhang,
Z.Shi,
X.C.Bai,
H.Yu,
I.J.Finkelstein.
Cryo-Em Structure of Human Cohesin-Ctcf Complex To Be Published.
Page generated: Wed Oct 30 13:33:56 2024
|
