Zinc in PDB 7sys: Structure of the Delta Dii Ires EIF2-Containing 48S Initiation Complex, Closed Conformation. Structure 12(Delta Dii).

The binding sites of Zinc atom in the Structure of the Delta Dii Ires EIF2-Containing 48S Initiation Complex, Closed Conformation. Structure 12(Delta Dii). (pdb code 7sys). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of the Delta Dii Ires EIF2-Containing 48S Initiation Complex, Closed Conformation. Structure 12(Delta Dii)., PDB code: 7sys:

Zinc binding site 1 out of 1 in the Structure of the Delta Dii Ires EIF2-Containing 48S Initiation Complex, Closed Conformation. Structure 12(Delta Dii).


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Delta Dii Ires EIF2-Containing 48S Initiation Complex, Closed Conformation. Structure 12(Delta Dii). within 5.0Å range: probe atom residue distance (Å) B Occ b:Zn201 b:50.1 occ:1.00 CB b:CYS26 1.6 32.8 1.0 SG b:CYS77 2.3 28.0 1.0 SG b:CYS74 2.3 27.1 1.0 SG b:CYS23 2.4 28.5 1.0 SG b:CYS26 2.4 32.8 1.0 CA b:CYS26 2.9 32.8 1.0 CB b:CYS23 2.9 28.5 1.0 N b:CYS26 3.3 32.8 1.0 CB b:CYS74 3.5 27.1 1.0 CB b:CYS77 3.5 28.0 1.0 C b:CYS26 3.6 32.8 1.0 N b:ALA27 3.9 27.0 1.0 N b:ARG28 4.3 24.5 1.0 C b:ASN25 4.3 37.2 1.0 N b:CYS74 4.3 27.1 1.0 CA b:CYS23 4.4 28.5 1.0 CB b:ARG28 4.5 24.5 1.0 O b:CYS26 4.5 32.8 1.0 CA b:CYS74 4.5 27.1 1.0 CA b:CYS77 4.9 28.0 1.0 OD1 b:ASN25 4.9 37.2 1.0 O b:ASN25 4.9 37.2 1.0 C b:CYS23 4.9 28.5 1.0 CA b:ARG28 5.0 24.5 1.0 CA b:ALA27 5.0 27.0 1.0

Z.P.Brown, I.S.Abaeva, S.De, C.U.T.Hellen, T.V.Pestova, J.Frank. Molecular Architecture of 40S Translation Initiation Complexes on the Hepatitis C Virus Ires. Embo J. V. 41 10581 2022.
ISSN: ESSN 1460-2075
PubMed: 35822879
DOI: 10.15252/EMBJ.2022110581