Zinc in PDB 7r0z: Dissociated S1 Domain of Alpha Variant Sars-Cov-2 Spike Bound to ACE2 (Non-Uniform Refinement)

Enzymatic activity of Dissociated S1 Domain of Alpha Variant Sars-Cov-2 Spike Bound to ACE2 (Non-Uniform Refinement)

All present enzymatic activity of Dissociated S1 Domain of Alpha Variant Sars-Cov-2 Spike Bound to ACE2 (Non-Uniform Refinement):
3.4.17.23;

Zinc Binding Sites:

The binding sites of Zinc atom in the Dissociated S1 Domain of Alpha Variant Sars-Cov-2 Spike Bound to ACE2 (Non-Uniform Refinement) (pdb code 7r0z). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Dissociated S1 Domain of Alpha Variant Sars-Cov-2 Spike Bound to ACE2 (Non-Uniform Refinement), PDB code: 7r0z:

Zinc binding site 1 out of 1 in 7r0z

Go back to Zinc Binding Sites List in 7r0z
Zinc binding site 1 out of 1 in the Dissociated S1 Domain of Alpha Variant Sars-Cov-2 Spike Bound to ACE2 (Non-Uniform Refinement)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Dissociated S1 Domain of Alpha Variant Sars-Cov-2 Spike Bound to ACE2 (Non-Uniform Refinement) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn901

b:97.9
occ:1.00
OE1 D:GLU402 2.3 18.3 1.0
NE2 D:HIS378 2.3 16.3 1.0
NE2 D:HIS374 2.3 15.0 1.0
OE2 D:GLU402 2.8 18.3 1.0
CD D:GLU402 2.8 18.3 1.0
CE1 D:HIS378 3.0 16.3 1.0
CD2 D:HIS374 3.1 15.0 1.0
CE1 D:HIS374 3.4 15.0 1.0
CD2 D:HIS378 3.4 16.3 1.0
ND1 D:HIS378 4.2 16.3 1.0
CG D:GLU402 4.3 18.3 1.0
CG D:HIS374 4.3 15.0 1.0
ND1 D:HIS374 4.4 15.0 1.0
CG D:HIS378 4.4 16.3 1.0
OE2 D:GLU375 4.5 15.1 1.0
CB D:GLU402 4.8 18.3 1.0
CA D:GLU402 4.8 18.3 1.0

Reference:

A.G.Wrobel, D.J.Benton, C.Roustan, A.Borg, S.Hussain, S.R.Martin, P.B.Rosenthal, J.J.Skehel, S.J.Gamblin. Evolution of the Sars-Cov-2 Spike Protein in the Human Host. Nat Commun V. 13 1178 2022.
ISSN: ESSN 2041-1723
PubMed: 35246509
DOI: 10.1038/S41467-022-28768-W
Page generated: Sat Apr 8 02:36:43 2023

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