Zinc in PDB 7qqe: Nuclear Factor One X - Nfix in P41212

The structure of Nuclear Factor One X - Nfix in P41212, PDB code: 7qqe was solved by M.Lapi, A.Chaves-Sanjuan, L.J.Gourlay, M.Tiberi, M.Polentarutti, N.Demitri, G.Bais, M.Nardini, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.59 / 3.50
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	65.009, 65.009, 127.89, 90, 90, 90
R / Rfree (%)	22.3 / 25.9

The binding sites of Zinc atom in the Nuclear Factor One X - Nfix in P41212 (pdb code 7qqe). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Nuclear Factor One X - Nfix in P41212, PDB code: 7qqe:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in the Nuclear Factor One X - Nfix in P41212


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Nuclear Factor One X - Nfix in P41212 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:118.5 occ:1.00 ND1 A:HIS167 2.1 114.2 1.0 SG A:CYS103 2.3 116.5 1.0 SG A:CYS162 2.4 106.7 1.0 SG A:CYS156 2.5 154.4 1.0 CB A:CYS156 2.9 114.7 1.0 CE1 A:HIS167 3.1 109.5 1.0 CG A:HIS167 3.1 108.5 1.0 CB A:CYS162 3.2 117.3 1.0 CA A:CYS156 3.2 125.1 1.0 CB A:HIS167 3.5 106.7 1.0 CB A:CYS103 3.5 118.8 1.0 CA A:CYS103 3.8 114.0 1.0 C A:CYS156 4.1 127.7 1.0 N A:SER157 4.2 124.7 1.0 NE2 A:HIS167 4.2 96.8 1.0 CD2 A:HIS167 4.2 97.8 1.0 N A:CYS156 4.4 115.7 1.0 N A:CYS103 4.5 115.2 1.0 CA A:CYS162 4.6 112.3 1.0 N A:ASN158 4.8 128.3 1.0 CA A:HIS167 5.0 101.0 1.0 O A:GLN155 5.0 129.6 1.0 O A:ASN158 5.0 124.4 1.0

Zinc binding site 2 out of 3 in the Nuclear Factor One X - Nfix in P41212


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Nuclear Factor One X - Nfix in P41212 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn202 b:124.1 occ:0.50 ND1 A:HIS166 2.0 110.2 1.0 O A:HOH304 2.2 117.6 0.5 CG A:HIS166 3.0 103.9 1.0 CE1 A:HIS166 3.1 113.4 1.0 CB A:HIS166 3.2 107.3 1.0 CA A:HIS166 3.9 109.3 1.0 CD2 A:HIS166 4.1 113.6 1.0 NE2 A:HIS166 4.2 120.5 1.0 N A:HIS166 4.8 104.9 1.0 NZ A:LYS138 4.9 113.8 1.0

Zinc binding site 3 out of 3 in the Nuclear Factor One X - Nfix in P41212


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Nuclear Factor One X - Nfix in P41212 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn203 b:155.3 occ:1.00 OE2 A:GLU17 2.0 142.8 1.0 ND1 A:HIS12 2.0 120.6 1.0 OE1 A:GLU17 2.1 139.7 1.0 CE1 A:HIS12 2.3 115.7 1.0 CD A:GLU17 2.3 129.2 1.0 CG A:HIS12 3.0 118.6 1.0 NE2 A:HIS12 3.2 116.9 1.0 CD2 A:HIS12 3.6 114.3 1.0 CG A:GLU17 3.8 112.2 1.0 CB A:HIS12 3.9 125.2 1.0 CA A:HIS12 4.3 129.3 1.0 CB A:GLU17 4.5 114.3 1.0 N A:MET13 5.0 127.2 1.0

M.Lapi, A.Chaves-Sanjuan, L.J.Gourlay, M.Tiberi, M.Polentarutti, N.Demitri, G.Bais, M.Nardini. Nuclear Factor One X - Nfix in P41212 To Be Published.