Zinc in PDB 7pe7: Cryo-Em Structure of Deptor Bound to Human Mtor Complex 2, Overall Refinement

Enzymatic activity of Cryo-Em Structure of Deptor Bound to Human Mtor Complex 2, Overall Refinement

All present enzymatic activity of Cryo-Em Structure of Deptor Bound to Human Mtor Complex 2, Overall Refinement:
2.7.11.1;

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryo-Em Structure of Deptor Bound to Human Mtor Complex 2, Overall Refinement (pdb code 7pe7). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Cryo-Em Structure of Deptor Bound to Human Mtor Complex 2, Overall Refinement, PDB code: 7pe7:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 7pe7

Go back to Zinc Binding Sites List in 7pe7
Zinc binding site 1 out of 2 in the Cryo-Em Structure of Deptor Bound to Human Mtor Complex 2, Overall Refinement


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Deptor Bound to Human Mtor Complex 2, Overall Refinement within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Zn4801

b:169.5
occ:1.00
NE2 F:HIS1515 2.1 146.8 1.0
SG F:CYS1523 2.3 158.8 1.0
SG F:CYS1520 2.3 145.7 1.0
SG F:CYS1651 2.3 127.6 1.0
CE1 F:HIS1515 2.8 146.8 1.0
CD2 F:HIS1515 3.3 146.8 1.0
CB F:CYS1651 3.4 127.6 1.0
CB F:CYS1520 3.4 145.7 1.0
CB F:CYS1523 3.5 158.8 1.0
CA F:CYS1651 3.9 127.6 1.0
ND1 F:HIS1515 4.0 146.8 1.0
N F:CYS1523 4.2 158.8 1.0
CG F:HIS1515 4.3 146.8 1.0
CA F:CYS1523 4.5 158.8 1.0
N F:CYS1651 4.7 127.6 1.0
CA F:CYS1520 4.8 145.7 1.0
C F:CYS1651 5.0 127.6 1.0

Zinc binding site 2 out of 2 in 7pe7

Go back to Zinc Binding Sites List in 7pe7
Zinc binding site 2 out of 2 in the Cryo-Em Structure of Deptor Bound to Human Mtor Complex 2, Overall Refinement


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Cryo-Em Structure of Deptor Bound to Human Mtor Complex 2, Overall Refinement within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Zn4801

b:198.6
occ:1.00
NE2 E:HIS1515 2.1 175.0 1.0
SG E:CYS1523 2.3 196.9 1.0
SG E:CYS1520 2.3 178.7 1.0
SG E:CYS1651 2.3 161.1 1.0
CE1 E:HIS1515 2.8 175.0 1.0
CD2 E:HIS1515 3.3 175.0 1.0
CB E:CYS1651 3.4 161.1 1.0
CB E:CYS1520 3.4 178.7 1.0
CB E:CYS1523 3.5 196.9 1.0
CA E:CYS1651 3.9 161.1 1.0
ND1 E:HIS1515 4.0 175.0 1.0
N E:CYS1523 4.2 196.9 1.0
CG E:HIS1515 4.3 175.0 1.0
CA E:CYS1523 4.5 196.9 1.0
N E:CYS1651 4.7 161.1 1.0
CA E:CYS1520 4.8 178.7 1.0
C E:CYS1651 5.0 161.1 1.0

Reference:

M.Waelchli, K.Berneiser, F.Mangia, S.Imseng, L.Craigie, E.Stuttfeld, M.N.Hall, T.Maier. Regulation of Human Mtor Complexes By Deptor Elife 2021.
ISSN: ESSN 2050-084X
DOI: 10.7554/ELIFE.70871
Page generated: Fri Sep 24 17:12:05 2021

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