Zinc in PDB 7p99: Structure of Human USPL1 in Complex with SUMO2

The structure of Structure of Human USPL1 in Complex with SUMO2, PDB code: 7p99 was solved by D.Reverter, L.Ying, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.04 / 1.80
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	50.709, 69.884, 53.643, 90, 90.66, 90
R / Rfree (%)	17.5 / 19.7

The binding sites of Zinc atom in the Structure of Human USPL1 in Complex with SUMO2 (pdb code 7p99). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of Human USPL1 in Complex with SUMO2, PDB code: 7p99:

Zinc binding site 1 out of 1 in the Structure of Human USPL1 in Complex with SUMO2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Human USPL1 in Complex with SUMO2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn601 b:24.2 occ:1.00 SG A:CYS400 2.2 27.8 1.0 SG A:CYS397 2.3 24.1 1.0 SG A:CYS364 2.3 27.8 1.0 SG A:CYS361 2.4 24.2 1.0 CB A:CYS397 3.1 22.5 1.0 CB A:CYS361 3.1 23.3 1.0 CB A:CYS400 3.3 27.7 1.0 CB A:CYS364 3.3 25.1 1.0 N A:CYS400 3.7 26.2 1.0 N A:CYS364 3.8 24.1 1.0 CA A:CYS400 4.1 30.6 1.0 CA A:CYS364 4.1 24.3 1.0 CB A:HIS366 4.4 23.7 1.0 CB A:ASN399 4.5 23.8 1.0 CA A:CYS397 4.5 20.9 1.0 CA A:CYS361 4.6 22.2 1.0 CB A:GLN363 4.6 30.5 1.0 C A:ASN399 4.7 28.2 1.0 C A:CYS364 4.7 27.7 1.0 C A:CYS400 4.7 33.3 1.0 CB A:SER402 4.7 35.5 1.0 C A:GLN363 4.8 27.0 1.0 N A:GLY365 4.8 21.9 1.0 N A:HIS366 4.8 23.0 1.0 N A:ASN401 4.9 29.2 1.0 N A:ASN399 4.9 23.6 1.0 ND2 A:ASN399 4.9 32.4 1.0 CA A:ASN399 4.9 23.1 1.0 N A:SER402 5.0 28.2 1.0

Y.Li, N.Varejao, D.Reverter. Structural Basis For the Sumo Protease Activity of the Atypical Ubiquitin-Specific Protease USPL1. Nat Commun V. 13 1819 2022.
ISSN: ESSN 2041-1723
PubMed: 35383180
DOI: 10.1038/S41467-022-29485-0