Zinc in PDB 7ork: La Crosse Virus Polymerase in Transcription Mode with Cleaved Capped Rna Entering the Polymerase Active Site

Enzymatic activity of La Crosse Virus Polymerase in Transcription Mode with Cleaved Capped Rna Entering the Polymerase Active Site

All present enzymatic activity of La Crosse Virus Polymerase in Transcription Mode with Cleaved Capped Rna Entering the Polymerase Active Site:
2.7.7.48;

Other elements in 7ork:

The structure of La Crosse Virus Polymerase in Transcription Mode with Cleaved Capped Rna Entering the Polymerase Active Site also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the La Crosse Virus Polymerase in Transcription Mode with Cleaved Capped Rna Entering the Polymerase Active Site (pdb code 7ork). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the La Crosse Virus Polymerase in Transcription Mode with Cleaved Capped Rna Entering the Polymerase Active Site, PDB code: 7ork:

Zinc binding site 1 out of 1 in 7ork

Go back to Zinc Binding Sites List in 7ork
Zinc binding site 1 out of 1 in the La Crosse Virus Polymerase in Transcription Mode with Cleaved Capped Rna Entering the Polymerase Active Site


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of La Crosse Virus Polymerase in Transcription Mode with Cleaved Capped Rna Entering the Polymerase Active Site within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn2303

b:140.2
occ:1.00
 CE1 A:HIS2169 1.9 117.7 1.0
OD1 A:ASP2178 2.1 130.4 1.0
NE2 A:HIS2169 2.2 117.7 1.0
NE2 A:HIS2182 2.3 132.5 1.0
SG A:CYS2064 2.4 118.9 1.0
CE1 A:HIS2182 2.8 132.5 1.0
CG A:ASP2178 3.2 130.4 1.0
ND1 A:HIS2169 3.2 117.7 1.0
CD2 A:HIS2182 3.6 132.5 1.0
CD2 A:HIS2169 3.6 117.7 1.0
N A:GLY2066 3.7 126.3 1.0
OD2 A:ASP2178 3.7 130.4 1.0
CG A:HIS2169 4.0 117.7 1.0
CD1 A:ILE2173 4.1 116.1 1.0
ND1 A:HIS2182 4.1 132.5 1.0
CB A:CYS2064 4.2 118.9 1.0
N A:GLU2065 4.2 125.1 1.0
CG1 A:ILE2173 4.3 116.1 1.0
CA A:GLY2066 4.4 126.3 1.0
CB A:ASP2178 4.4 130.4 1.0
N A:SER2067 4.4 124.5 1.0
CG A:HIS2182 4.5 132.5 1.0
CD2 A:TYR2181 4.5 131.0 1.0
O A:ASP2178 4.6 130.4 1.0
CA A:GLU2065 4.7 125.1 1.0
C A:GLU2065 4.7 125.1 1.0
O A:SER2067 4.7 124.5 1.0
C A:CYS2064 4.9 118.9 1.0
C A:GLY2066 4.9 126.3 1.0

Reference:

B.Arragain, Q.Durieux Trouilleton, F.Baudin, J.Provaznik, N.Azevedo, S.Cusack, G.Schoehn, H.Malet. Structural Snapshots of La Crosse Virus Polymerase Reveal the Mechanisms Underlying Peribunyaviridae Replication and Transcription. Nat Commun V. 13 902 2022.
ISSN: ESSN 2041-1723
PubMed: 35173159
DOI: 10.1038/S41467-022-28428-Z
Page generated: Wed Oct 30 08:45:43 2024

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