Zinc in PDB 7kyj: Structure of A Gnat Superfamily PA3944 Acetyltransferase in Complex with Zinc

Protein crystallography data

The structure of Structure of A Gnat Superfamily PA3944 Acetyltransferase in Complex with Zinc, PDB code: 7kyj was solved by M.P.Czub, P.J.Porebski, M.Cymborowski, I.G.Shabalin, C.T.Reidl, D.P.Becker, W.Minor, Center For Structural Genomics Of Infectiousdiseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.17 / 2.00
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 36.423, 43.801, 60.793, 98.05, 109.51, 90.10
R / Rfree (%) 20 / 24.5

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of A Gnat Superfamily PA3944 Acetyltransferase in Complex with Zinc (pdb code 7kyj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of A Gnat Superfamily PA3944 Acetyltransferase in Complex with Zinc, PDB code: 7kyj:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 7kyj

Go back to Zinc Binding Sites List in 7kyj
Zinc binding site 1 out of 2 in the Structure of A Gnat Superfamily PA3944 Acetyltransferase in Complex with Zinc


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of A Gnat Superfamily PA3944 Acetyltransferase in Complex with Zinc within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn202

b:31.2
occ:1.00
NE2 B:HIS0 2.0 77.4 1.0
O B:HOH372 2.1 17.6 1.0
OXT A:ACT201 2.1 29.5 1.0
NE2 A:HIS179 2.1 25.2 1.0
CE1 B:HIS0 3.0 78.9 1.0
C A:ACT201 3.0 19.9 1.0
CD2 B:HIS0 3.0 75.3 1.0
CE1 A:HIS179 3.1 26.1 1.0
CD2 A:HIS179 3.1 22.4 1.0
CH3 A:ACT201 3.3 32.2 1.0
CG2 A:THR142 4.0 25.4 1.0
ND1 B:HIS0 4.1 77.2 1.0
CG B:HIS0 4.1 74.6 1.0
O A:ACT201 4.1 27.2 1.0
ND1 A:HIS179 4.2 22.5 1.0
CG A:HIS179 4.2 21.4 1.0
CA A:THR141 4.9 17.2 1.0
N A:THR142 4.9 18.0 1.0
O A:PHE43 4.9 30.9 1.0
CE1 A:PHE44 5.0 36.5 1.0

Zinc binding site 2 out of 2 in 7kyj

Go back to Zinc Binding Sites List in 7kyj
Zinc binding site 2 out of 2 in the Structure of A Gnat Superfamily PA3944 Acetyltransferase in Complex with Zinc


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of A Gnat Superfamily PA3944 Acetyltransferase in Complex with Zinc within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn202

b:37.7
occ:1.00
NE2 B:HIS179 2.0 33.5 1.0
O B:ACT201 2.1 42.8 1.0
O B:HOH370 2.1 30.3 1.0
O B:HOH352 2.1 40.8 1.0
CD2 B:HIS179 3.0 27.4 1.0
CE1 B:HIS179 3.0 35.5 1.0
C B:ACT201 3.1 49.9 1.0
CH3 B:ACT201 3.4 42.6 1.0
CG2 B:THR142 4.1 27.3 1.0
ND1 B:HIS179 4.1 29.4 1.0
CG B:HIS179 4.1 27.7 1.0
OXT B:ACT201 4.2 45.6 1.0
O B:PHE43 4.7 33.2 1.0
O B:HOH367 4.7 30.6 1.0
CA B:THR141 4.8 20.4 1.0
CD1 B:PHE44 4.9 34.4 1.0
N B:THR142 4.9 23.3 1.0
CD2 B:HIS167 4.9 55.5 1.0
CE1 B:PHE44 5.0 41.4 1.0

Reference:

M.P.Czub, P.J.Porebski, M.Cymborowski, I.G.Shabalin, W.Minor. Structure of A Gnat Superfamily PA3944 Acetyltransferase in Complex with Zinc To Be Published.
Page generated: Wed Dec 16 14:04:52 2020

Last articles

Zn in 7L0B
Zn in 7KZZ
Zn in 7KZL
Zn in 7L3O
Zn in 7L52
Zn in 7L6T
Zn in 7KZ7
Zn in 7L6R
Zn in 7KKM
Zn in 7KKQ
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy