Zinc in PDB 7k7g: Nucleosome and GAL4 Complex

The binding sites of Zinc atom in the Nucleosome and GAL4 Complex (pdb code 7k7g). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Nucleosome and GAL4 Complex, PDB code: 7k7g:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Nucleosome and GAL4 Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Nucleosome and GAL4 Complex within 5.0Å range: probe atom residue distance (Å) B Occ M:Zn701 b:428.9 occ:1.00 SG M:CYS14 2.3 380.1 1.0 SG M:CYS17 2.3 375.2 1.0 SG M:CYS30 2.5 398.0 1.0 SG M:CYS24 2.8 349.6 1.0 ZN M:ZN702 3.1 428.3 1.0 CB M:ASN32 3.1 413.8 1.0 CB M:CYS30 3.3 398.0 1.0 CB M:CYS14 3.4 380.1 1.0 ND2 M:ASN32 3.7 413.8 1.0 N M:CYS14 3.8 380.1 1.0 CB M:CYS24 3.9 349.6 1.0 CA M:CYS24 4.0 349.6 1.0 CG M:ASN32 4.0 413.8 1.0 NH2 M:ARG26 4.0 339.6 1.0 CB M:CYS17 4.0 375.2 1.0 CA M:CYS14 4.2 380.1 1.0 CA M:ASN32 4.3 413.8 1.0 N M:ASP25 4.3 357.6 1.0 SG M:CYS33 4.4 424.6 1.0 N M:ASN32 4.4 413.8 1.0 O M:LYS23 4.4 334.6 1.0 C M:CYS24 4.7 349.6 1.0 CA M:CYS30 4.7 398.0 1.0 N M:CYS33 4.7 424.6 1.0 N M:CYS17 4.8 375.2 1.0 C M:PRO13 4.9 339.6 1.0 C M:ASN32 4.9 413.8 1.0

Zinc binding site 2 out of 2 in the Nucleosome and GAL4 Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Nucleosome and GAL4 Complex within 5.0Å range: probe atom residue distance (Å) B Occ M:Zn702 b:428.3 occ:1.00 SG M:CYS33 2.3 424.6 1.0 CB M:CYS14 2.3 380.1 1.0 SG M:CYS14 2.3 380.1 1.0 CB M:CYS30 2.5 398.0 1.0 SG M:CYS42 2.9 431.4 1.0 ZN M:ZN701 3.1 428.9 1.0 SG M:CYS30 3.6 398.0 1.0 CA M:CYS30 3.8 398.0 1.0 CB M:CYS33 3.8 424.6 1.0 CA M:CYS14 3.8 380.1 1.0 O M:PRO29 3.9 389.4 1.0 N M:CYS30 4.0 398.0 1.0 CB M:CYS42 4.1 431.4 1.0 C M:PRO29 4.2 389.4 1.0 N M:CYS33 4.3 424.6 1.0 N M:CYS14 4.4 380.1 1.0 NH2 M:ARG26 4.5 339.6 1.0 SG M:CYS17 4.5 375.2 1.0 C M:CYS30 4.6 398.0 1.0 C M:CYS14 4.7 380.1 1.0 CA M:CYS33 4.7 424.6 1.0 O M:CYS30 4.8 398.0 1.0 CB M:ASN32 4.9 413.8 1.0

R.Guan, T.Lian, B.R.Zhou, E.He, C.Wu, M.Singleton, Y.Bai. Structural and Dynamic Mechanisms of CBF3-Guided Centromeric Nucleosome Formation. Nat Commun V. 12 1763 2021.
ISSN: ESSN 2041-1723
PubMed: 33741944
DOI: 10.1038/S41467-021-21985-9