Atomistry » Zinc » PDB 7ftq-7gqt » 7fu4
Atomistry »
  Zinc »
    PDB 7ftq-7gqt »
      7fu4 »

Zinc in PDB 7fu4: Crystal Structure of Human Cyclic Gmp-Amp Synthase in Complex with 2- [(2-Fluoro-4-Phenylphenyl)Methylamino]-5-Propyl-4H-[1,2,4]Triazolo[1, 5-A]Pyrimidin-7-One

Enzymatic activity of Crystal Structure of Human Cyclic Gmp-Amp Synthase in Complex with 2- [(2-Fluoro-4-Phenylphenyl)Methylamino]-5-Propyl-4H-[1,2,4]Triazolo[1, 5-A]Pyrimidin-7-One

All present enzymatic activity of Crystal Structure of Human Cyclic Gmp-Amp Synthase in Complex with 2- [(2-Fluoro-4-Phenylphenyl)Methylamino]-5-Propyl-4H-[1,2,4]Triazolo[1, 5-A]Pyrimidin-7-One:
2.7.7.86;

Protein crystallography data

The structure of Crystal Structure of Human Cyclic Gmp-Amp Synthase in Complex with 2- [(2-Fluoro-4-Phenylphenyl)Methylamino]-5-Propyl-4H-[1,2,4]Triazolo[1, 5-A]Pyrimidin-7-One, PDB code: 7fu4 was solved by L.Leibrock, J.Benz, K.Groebke-Zbinden, D.Hunziker, M.G.Rudolph, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.54 / 1.93
Space group P 21 2 21
Cell size a, b, c (Å), α, β, γ (°) 45.171, 59.343, 163.233, 90, 90, 90
R / Rfree (%) 20.7 / 25.9

Other elements in 7fu4:

The structure of Crystal Structure of Human Cyclic Gmp-Amp Synthase in Complex with 2- [(2-Fluoro-4-Phenylphenyl)Methylamino]-5-Propyl-4H-[1,2,4]Triazolo[1, 5-A]Pyrimidin-7-One also contains other interesting chemical elements:

Fluorine (F) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Human Cyclic Gmp-Amp Synthase in Complex with 2- [(2-Fluoro-4-Phenylphenyl)Methylamino]-5-Propyl-4H-[1,2,4]Triazolo[1, 5-A]Pyrimidin-7-One (pdb code 7fu4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Human Cyclic Gmp-Amp Synthase in Complex with 2- [(2-Fluoro-4-Phenylphenyl)Methylamino]-5-Propyl-4H-[1,2,4]Triazolo[1, 5-A]Pyrimidin-7-One, PDB code: 7fu4:

Zinc binding site 1 out of 1 in 7fu4

Go back to Zinc Binding Sites List in 7fu4
Zinc binding site 1 out of 1 in the Crystal Structure of Human Cyclic Gmp-Amp Synthase in Complex with 2- [(2-Fluoro-4-Phenylphenyl)Methylamino]-5-Propyl-4H-[1,2,4]Triazolo[1, 5-A]Pyrimidin-7-One


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Human Cyclic Gmp-Amp Synthase in Complex with 2- [(2-Fluoro-4-Phenylphenyl)Methylamino]-5-Propyl-4H-[1,2,4]Triazolo[1, 5-A]Pyrimidin-7-One within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn601

b:47.5
occ:1.00
 NE2 A:HIS390 2.1 45.7 1.0
SG A:CYS397 2.2 51.5 1.0
SG A:CYS396 2.3 48.3 1.0
SG A:CYS404 2.4 47.6 1.0
CD2 A:HIS390 3.0 37.8 1.0
CE1 A:HIS390 3.2 41.3 1.0
CB A:CYS404 3.3 46.3 1.0
CB A:CYS397 3.4 46.6 1.0
CB A:CYS396 3.6 42.5 1.0
N A:CYS397 3.8 56.6 1.0
N A:CYS404 3.8 58.9 1.0
C A:CYS396 3.9 54.8 1.0
O A:HOH763 3.9 42.8 1.0
CA A:CYS397 4.1 54.6 1.0
CA A:CYS404 4.1 59.7 1.0
CG A:HIS390 4.2 42.1 1.0
ND1 A:HIS390 4.2 40.3 1.0
CA A:CYS396 4.3 50.9 1.0
O A:CYS396 4.3 50.4 1.0
NH1 A:ARG406 4.4 44.4 1.0
O A:HOH776 4.5 50.1 1.0
C A:CYS404 4.7 56.2 1.0
O A:HOH760 4.7 44.3 1.0
O A:HOH774 4.7 56.3 1.0
O A:CYS404 4.7 50.3 1.0
C A:LYS403 5.0 74.3 1.0

Reference:

K.Groebke-Zbinden, A.Vandemeulebroucke, M.Hilbert, M.G.Rudolph. Crystal Structure of A Human Cyclic Gmp-Amp Synthase Complex To Be Published.
Page generated: Tue Oct 29 20:39:08 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy